Lates calcarifer (barramundi perch): 108898941
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Entry
108898941 CDS
T04895
Name
(RefSeq) acidic mammalian chitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00520
Amino sugar and nucleotide sugar metabolism
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
108898941
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
108898941
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GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
108898941
NCBI-ProteinID:
XP_018554605
UniProt:
A0A4W6FVD8
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Position
LG12:complement(20110661..20113999)
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AA seq
481 aa
AA seq
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MGKLLICVGLALLLHVQLGSSYILSCYFTNWGQYRPGAGKYFPTNIDPCLCDHLIYAFAG
MDNNMIKTYEWDDEKLYGQFQALKNQNSNLKTLLAIGGWNFGTQKFTAMVSTAANRQTFI
NSVITFLRHYEFDGLDIDWEYPGSRGSPPQDKERFTVLVQELMSAFEAEGKKTNRPRLML
TAAVSAGKGTIDSGYQIAQIGGILDYFHVMTYDFHGSWEHNVGENSPLYKGPADQGSMIY
FNVDYAMNYWKSNGAPAEKLLVGFPTYGHTFRLASSNTAVGAPASGPGPAGPFTRQAGFW
AYYEICTFLKQGATQAWDGPQDVPYAYNQGTWVGYDNVKSFQIKIQWLKQGGFGGAMVWS
LDLDDFSGTFCGQGRYPLINTLKSGLGTGASCTARPQPLPPVKPTQAPLQPGGGGGSSSG
GSSSGGSSSTGSGFCAGKANGVYPDATNKNHFYECNQGQTYIQHCAVGLVFDDSCKCCNW
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctactcatctgcgtcggactggcactcctgctgcacgtgcagctcggatca
tcctacatcctctcctgttatttcactaactggggacagtaccgtcccggagcaggcaag
tatttccccaccaacatcgacccatgtctctgtgaccacctcatctatgccttcgctgga
atggacaacaacatgatcaagacctatgagtgggatgatgagaaactctatggacagttc
caggccctgaagaaccagaacagcaacctgaagactctgctggccatcggaggatggaac
tttggtactcagaagttcacagccatggtttccactgctgccaatcgtcagaccttcatc
aacagcgtgatcactttcctgcgtcactatgagtttgatggtctggatattgactgggag
taccctggctctcgtggctcccctcctcaggataaggagcgcttcaccgtactggtccag
gaactgatgagcgcctttgaggcagagggcaagaagaccaaccgtcctcgtctgatgctg
actgctgctgtgtctgctggaaagggaaccatcgactctggataccagattgcccagatt
ggcggtattctggactacttccacgtcatgacctatgacttccacggttcttgggagcac
aatgttggagagaacagccctctgtacaagggccccgctgaccagggatctatgatctac
ttcaatgtggactatgctatgaactactggaagagcaacggtgccccagctgagaagctg
ctggttggtttccccacctatggccacaccttccgtctggcttcctctaacacagctgtg
ggagctcccgccagcggacctggacctgctggacctttcactcgtcaggctggcttctgg
gcctactatgagatctgcactttcctgaagcagggagccacccaggcttgggacggcccc
caggatgtgccatatgcctacaaccagggaacctgggttggatatgacaatgtgaagagc
ttccagatcaagattcagtggctgaagcagggtggtttcggtggagccatggtatggagt
ctggatctggatgacttcagtggcactttctgcggccagggaagataccctctgatcaac
accctcaagagtggactgggaactggagcttcttgcaccgctcgtcctcagcccctgccc
ccagtcaaaccaacccaggctccactccagcctggcggcggtggtggcagcagcagtggc
ggcagcagcagcggtggcagcagcagcacaggatctggcttctgcgctggaaaggctaac
ggagtctacccagacgcaaccaacaagaaccacttctatgagtgcaaccagggacagacc
tacatccagcactgtgctgttggtctggtgtttgatgacagctgcaagtgctgcaactgg
gcttaa
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