Lates calcarifer (barramundi perch): 108898966
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Entry
108898966 CDS
T04895
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
KO
K17848
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04068
FoxO signaling pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
108898966
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108898966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108898966
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108898966
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
PH_6
Ank_5
Ank_4
PH_4
Motif
Other DBs
NCBI-GeneID:
108898966
NCBI-ProteinID:
XP_018554652
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All DBs
Position
LG12:20709934..20728813
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AA seq
1225 aa
AA seq
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MSKAANPQRRTTYLISLTLVKVEAVPEDVAENQKEALPEGEGSPDKEKKEEEEKEEVSNV
PEKEEGLVSAEAVAKENVQVEEVEQVPVKYGSPTENRGKPERRETYGHQKDIAAAGKCKD
TSLVHPPVRQMIKVYGGTTSEGTVRREGPRSDALRPKTELYREPPMLFLKGENGADLNSR
SRCSLPFSIPPQVTQRPEVLMRSHAGGNSACWRELREANTSLYHSAKTLDRRDNRIGDQS
PLMAATTLGPYRASWADSDGRGTLIRPGAPMAGGFSGIMTRDSPQGERFKTVSVSLPAPP
AADVSRPQRKGTSRTLDNSDLHSLSEDLKKGKEGQGGTIQRVPPRDRKMLKFISGIFTKS
TAVPPSVNTASPLYPAMERGSSEEEAACTSSQEWTMSQTVQELHLGVLGGLCSGKSALVH
RHLTGSYLPLENAEGRQYIKDVLVDGQSHLLIIREETELPGAQFASWVDAVILVFSLENE
ASFQEVYKIYHQLAIHRPVSEIPFVVVGTQDKISSTNPRVIDDARARQLCSDVRRCTYYE
TCATYGLNVNRVFTDAAQKIMAAKKQAALLASCKSLPNSPSHSGGSTPVSGVFPGQASNG
GQSSDYSSSLPSTPVISHKEIARTARGEKQDSATPGSVRSATRRRTSRFAGRRGSDSNRR
SADYKGDLGSGRSIPIKQGILLKRSGSSLNKEWKKKYVTLSNDGILSYHSSVNDYMLNTP
GKEMDLLRVTVKVPGKRPPRAVPACGPPVGLNGRVKDVPGPEGVSPVPVSASSLLQVEEM
EGLGGALFLRSNRGVQRCPSTVSNHAQSVDSAVEGVSSSSSTKDVGSASPVTDRKKHRRK
KSMNQKGDATIGQADAKRKMWKLKSFGSLRNVSKTDEDNFDFLIVSSTGQTWHFEAQSVE
ERDSWVQAIESQILASLQLCESSKNKARKNSQSEAVALQAIRNAKGNNFCVDCDAPNPTW
ASLNLGALICIECSGIHRNLGTHLTRVRSLDLDDLPRELTLVLSAIGNHMVNSIWEARTL
GRRKPAPDATREERESWIRAKYEQKLFVAPLPPPTPSEGPDITLSGRLLLAVMEHNLPKL
LLLLAHCTKEDINAPLSLALSSRSLLALRLPGSALHAACQQADVVMTQLLVWYGCDVRYR
DAQGQTALALARSAGSQECVDILLQYGCPNEPPPSVGATVGFAAAATSSFPVAMTPSLTV
ATTFKISHKSGGASLSYSTSRRAVS
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcagccaacccacagagacgcaccacctacctcatttccctcactctggtg
aaggttgaggctgtgccagaggatgtagcagagaaccagaaggaggctcttccagagggg
gaagggagccccgacaaggagaagaaggaggaggaggagaaggaggaggtgagcaatgtc
cctgaaaaggaggaaggacttgtgtcagcggaagcggtggcaaaagaaaacgtgcaggtg
gaagaagtggagcaggtgccggtcaagtatggcagccccactgagaacagagggaagcct
gagaggagggaaacttatggacaccaaaaagacattgcagcagcgggtaaatgcaaagac
acctctcttgtacatccacctgttaggcaaatgatcaaagtatatgggggaactacctct
gagggaactgtgcgcagagagggacctcgctcagatgccttgcgccctaagacggagctc
tacagggagccccccatgttgttcctaaagggtgagaatggagcagaccttaacagccgc
tcacgttgcagcctccctttctccatcccgccgcaggtcacccagcgtcctgaggtcctg
atgaggtcacatgcaggaggcaactctgcatgctggagggagctcagagaggccaacacg
agcctgtatcactctgctaagactttggaccgaagggacaaccgtatcggggaccagtcc
cccttaatggcagctacaactctggggccttacagggcatcctgggccgacagcgacggc
aggggcacgctcattcgccctggagctcccatggccggaggattttcaggcataatgacc
cgggacagccctcagggggagagatttaagacagtgtctgtttccctgcctgcacctcct
gccgctgacgtgtccaggcctcagagaaaaggtacaagtcgtaccctggacaacagcgac
ctacattccctctctgaggacctgaagaaggggaaggagggccagggaggaacgatccag
cgagtcccccctcgtgaccgcaagatgctgaagttcatcagcgggattttcaccaaaagt
acagctgtgccacccagcgtcaacactgcttctcctctctatccagctatggagaggggc
tcgagtgaggaggaagctgcatgcaccagcagtcaagaatggaccatgagccaaactgtg
caagagcttcatctgggtgttttgggaggtctgtgcagtgggaagtctgctctggtccac
agacacctgacaggaagttacctgccgctagagaacgctgagggacggcagtacattaag
gatgtactggttgacggacagagccacctgttgataatcagagaagagacagaactcccg
ggtgctcagtttgcaagttgggtggatgcagttatcctggtcttcagtctggaaaatgag
gccagtttccaggaagtttacaaaatataccaccagcttgcaatccaccggcctgtctct
gagatacctttcgtagtagttggcactcaggataagatcagcagcaccaacccaagagta
attgatgatgccagggccagacagctgtgctcagatgtgcggcgctgcacttactatgaa
acctgtgccacgtacggcctcaatgtgaaccgggtcttcaccgatgctgctcagaagatc
atggcagccaagaagcaagctgctctactggcttcctgtaaatctctgcctaactctccc
agtcactctggaggctcaaccccagtgtctggcgtctttccaggacaggccagtaacggt
ggtcagagcagtgattactcctcatcgcttccctccactcctgtgatcagtcataaagag
atcgccaggacagcaagaggggagaagcaggatagtgccacacctgggtcagtccgcagc
gccacccgaagacgcacctctcgatttgcgggtcggagaggcagtgactcaaacagaaga
agtgcagactataagggagatctgggcagtggacgctccatacccatcaaacagggcatc
ttgctgaaacgcagtgggagctcgctcaacaaagagtggaagaagaagtatgtcacgctg
tccaacgacggcatactgtcctatcactccagtgtcaatgactacatgctgaataccccg
ggaaaagagatggacctgctgcgagtgaccgtgaaggtgccgggaaagcgaccgcctcgt
gctgtacctgcctgcggccctccggtcgggctcaatgggcgggtcaaggacgtgccagga
cctgagggtgtcagcccagtccctgtaagtgccagtagcctcctgcaagtggaggaaatg
gaagggctgggtggtgcactcttcctgaggagtaacagaggggtgcagcgatgtccttcc
acagtatccaaccacgctcaaagtgttgactctgcagtcgagggagtctccagctcctcc
tccaccaaagatgtaggctctgcctccccagtgaccgataggaagaagcatcgcaggaag
aagagcatgaaccagaaaggagatgccaccattggccaagcagatgcaaagcgcaaaatg
tggaaacttaaaagctttggtagcttaagaaacgtaagcaagacagatgaggataacttt
gacttcctcattgtgtcgagcaccggccagacgtggcacttcgaggcccagagtgtggag
gagagggattcttgggtccaagccatcgagagccagatcctggccagcctgcaactgtgt
gagagcagcaaaaacaaggctcgcaagaacagccagagtgaagcagtggctctgcaggca
atccgcaacgcgaagggcaacaacttctgcgttgactgtgatgctccgaatccaacctgg
gccagtctgaacttgggcgctctcatatgcatcgagtgctctgggatccacaggaacttg
gggacccacctgacgcgtgtccgctcgctggacctcgacgatctaccacgagagctgact
ctggtcctcagcgccattggcaaccacatggtcaacagtatatgggaggcacgcacgctg
ggacggcgtaaaccagcgcctgatgccacacgagaggagcgggagtcatggatccgagcc
aaatatgagcagaaactgtttgtggcaccgttgcctcctcccactcccagcgagggccca
gacatcacactgtctggccgtcttctgttggcagtgatggagcacaacctccccaagctg
ctgctccttttggcccactgcactaaggaggacattaatgcacctctcagcctggccctc
tcctccaggtcgctcctggctctgcgtctgcctggctcggccctgcacgctgcctgtcag
caggccgatgtggtgatgacacagctccttgtttggtatggctgtgatgttcgctacagg
gacgctcaggggcagacggcgttggctctggctcgcagcgctggcagccaggaatgcgtt
gacatcttgctccagtacgggtgccccaacgagccgcccccctccgtcggagcgacagtc
ggttttgcggcagccgccacctccagcttccctgttgccatgacgccgagcctcacagtc
gccacaacgttcaagatctcgcacaagagtggcggcgccagcttgagctacagcacctct
agaagagcagtgtcataa
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