Lates calcarifer (barramundi perch): 108899467
Help
Entry
108899467 CDS
T04895
Name
(RefSeq) high affinity nerve growth factor receptor isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108899467
04020 Calcium signaling pathway
108899467
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108899467
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108899467
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108899467
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
108899467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
Ig_2
ig
LRR_8
C2-set_2
TrkA_TMD
LRR_5
Haspin_kinase
CFC
Motif
Other DBs
NCBI-GeneID:
108899467
NCBI-ProteinID:
XP_018555426
UniProt:
A0A4W6BMY2
LinkDB
All DBs
Position
LG15:complement(5238777..5296544)
Genome browser
AA seq
802 aa
AA seq
DB search
MALAPRALALLLPLVLALLSLAPAPTLGGCPSACRCSYSLLQCLEPDGITGIPILATHES
ENVTEIYIENQTGLENITEFDLVNYRELKNLTVTSCKLRLISANAFQFNLKLQYVNLASN
SLEHISWRVFHFLPLLNLVLRDNPLICSCDHYWLQQWQRNDRGDLDNQMLSCFSDNEEIP
LNSLVLDNCSLPVVSIVYSQYKIQEGGNLTFECHVTGSPTPSVRWQTEGLSSPFLTQERI
WGSTLELVLHLSNVSSKDNLRNLTCEAENQAGPREEMVQLDIEFPVKILFLRDAVQQHFW
CFPFAVDGNPEPSFTWLHNGKLLNETVYTYTQFITDSSDGSVKHGCLFLNKPTHLNNGLY
TLIVQNKLGRDQATAIGNFMDNPFGTLDPDGAIPVHNVNPVPTNKSVMDVTENSESRVFV
VSVAVGLAVFACTFLLIMVLVINRCGQHSKFGIHRSSVLGTEDDLAVSLRFMNFGTSPPS
SDEDSGLSSFVENPQYFCGIIKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAECANLSP
DSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQHIVRFYGVCTDGEPLAMVFEYMRH
GDLNRFLRAHGPDARILEESKMPPLGELTLPQMLHIAAQIASGMVYLASLHFVHRDLATR
NCLVGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFG
VVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVYLLMQGCWQREPQQRMVI
KDIHSRLLALVKNPPVYLDILG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggctctggcaccccgggccctggcacttctcctgcccctggtgcttgccctgctcagc
ctggccccggcgcctaccttgggaggatgcccgtcggcttgtcggtgctcttactccttg
ctgcagtgcctggaacctgatggtatcaccggcatcccgattctggcaacgcatgagagc
gagaatgtgaccgagatttacatagaaaaccaaacaggcctggagaatataacagaattt
gatcttgttaactacagagagctgaagaacctcacggtcacatcatgtaagctgaggctc
atctctgccaacgccttccaattcaacctcaagctccagtatgtaaacctggcatcaaac
tctctcgaacacatctcctggagggtgtttcattttctacctttgctcaacctggttttg
agggacaaccctctcatctgctcatgtgaccactactggctacagcagtggcagcgtaat
gaccgcggtgacctggacaaccagatgttgtcctgtttctcagacaacgaggaaataccc
ctcaactctttggtgttagataactgcagtctgcctgtggtgtctattgtctactctcag
tacaagattcaagaaggaggcaacctgacatttgagtgtcatgtgacaggaagtcctact
cccagcgtgagatggcaaactgaggggctcagctctccattccttacccaggagagaatc
tggggctccacattagagctggtccttcatctcagcaacgtttcctccaaagacaacctg
cgcaatctcacctgtgaggcagagaaccaagctgggcccagggaggagatggtgcaattg
gacattgagtttccagtcaaaatccttttcctgagagacgctgtgcagcaacatttctgg
tgtttcccctttgctgtggacggtaatcctgagccaagcttcacctggctgcacaatggc
aaactactgaacgagacagtctatacatacacccagttcatcactgactcatctgacgga
tcagttaaacacggatgcctcttcctcaacaagcccacacacctcaacaatggcctctac
actctgattgtgcagaacaaactgggaagggatcaggccaccgccattgggaattttatg
gacaacccttttgggaccctcgatcctgacggggccattcccgtccacaatgtgaatcca
gttcctacaaacaaatcagtcatggacgtcacagagaactcagagagtcgagtgtttgtg
gtgtctgtggctgtgggtcttgctgtgtttgcctgcacctttctccttatcatggttttg
gttattaacaggtgtggccagcattccaagtttggtattcaccgttcatcagttttgggt
acagaggatgacctggctgtgtcgcttcgtttcatgaacttcggaaccagcccgccttcc
tcagatgaagactctggtttatccagctttgtcgagaatccacagtacttctgcggcatc
atcaaggataaagacatgtgtgtccagcacattaagcggcaggacattgtgttgaagtgg
gagctgggtgaaggagcgtttggcaaagtctatctggcagagtgtgccaacctgagcccc
gacagcgacaagatgctggtcgccatcaagactctgaaggacgccaacgagtcaacccgg
caggacttccagagggaggcggagctgctgactgtgctccagcatcagcatattgtgcga
ttctacggcgtctgtacggatggggagccgctggccatggtgttcgaatacatgaggcat
ggagacctcaaccgcttccttcgagctcacggccctgatgctcgtatcctggaggagtca
aagatgcccccactgggcgagctcactctgcctcagatgctgcacatcgctgcccagatc
gcctcaggcatggtctacctggcatcgctgcactttgttcaccgtgacctggcaacccgc
aactgtctggtgggagagggcctggtggtcaaaatcggagactttggcatgtcacgagac
atctacagcacagactactatcgggtgggtggtcgtaccatgctgccaatccgctggatg
cccccggagagcatcatgtacaggaaattcaccacggagagcgacatctggagcttcggc
gtggtcctctgggagatcttcacctacggcaaacagccctggtaccagctgtccaacagt
gaggccatcgaatgcatcacgcagggacgggaactggaaaggccgcgcacctgccccaag
gaggtttacctgctgatgcagggctgctggcagagagagccccagcagaggatggtcatc
aaggacatccacagccgcctgctggccctggtcaaaaacccaccagtttacctggatatc
ctgggatga
DBGET
integrated database retrieval system
