Lates calcarifer (barramundi perch): 108902903
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Entry
108902903 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase zeta
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108902903
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108902903
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108902903
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108902903
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Others
108902903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Y_phosphatase3
PTPlike_phytase
DSPc
GUN4_N
Motif
Other DBs
NCBI-GeneID:
108902903
NCBI-ProteinID:
XP_018560432
LinkDB
All DBs
Position
LG10:complement(1211631..1290524)
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AA seq
1909 aa
AA seq
DB search
METRGCCLLLAALLILLCQRADGYAYRNQRKFSEDIDWSYAGTLNQNNWAKKFPSCSNAK
QSPINIEENLAQVKLQYQKLQFEGWESLTGDRTTIKNNGKTVAVDVDGEFYISGGGLRSK
FKVGRITFHWGRCNTSSDGSEHSLDGVKYPLEMQIYCYESQRFDSLDETIKAGGRITALA
VLFETNSEDNANYVAIVDSILSVSRYGKSAEVLPFTLRGLLPNSTEKYFIYNGSLTTPPC
SEIVEWIVFKNTVAISDEQLEMFCEVMTMQQAGYVMLMDYLQNNYREQQEQFMGQVFSSY
TGTEEVLIPVCSSEPENIQAVPYNLSSLLVTWERPRAVYDASIEKYSVSYRLANVENSVP
AEYLTDGDQDVGAILDDLLANSSYVVQVVAVCTNGLYGRVSDLLTVVMPADDPENVLDPH
SDEFDDEGNYEPDLPWNEPVQTEDYNLAWVPRNSPRTTTSGSNLLPLPGIRTTTAEPSQR
RTSTDPLPPARSTHSGHVLSQLEETTPHSSSTQPPEVTLLPETRKEADFSGNAPFYSTTT
STTTTTKGFFISTSTTPIYSNTKTDGVLGGIGPIGGASTTTSTIAKTKDGKGISSYSTTT
TTLRSHTRHASSTTPSSFFIQAEIDRGLAQPRDEDTTAERGGLLEIQPSTSQPSSSSEAV
PSSPTSPSMPHFSSSTTSVRLSAVLLQTSKPLSNGESPSVLPSSSSSSFVSSPLCDNMDP
DTAPSTCLHDPSSSSWPLLSASAPDSQHAAIALLSSKDLASPSTPTLTASTLPHLPHPSH
PLSGWETDPVFPGVGFDDNDSDGDMLSGSSSSSVSSGDPLVFSDTPPLQTMPDPSGTTVA
AEPSESSWDPLLSTVSLSLSPTLQPSVLLSSDVILSGATPGLYRSFSAGFEDSRYATGST
IESFLPEVAGDGFSLASDVDTMCGCSLEPSASSSWLHASPHVPLPSSAWDSASLELYSSV
GVLSASGVGIDNLLHSLSVAGSDGLSLDQPLLSHSNISPSMSSLHSHLLQATHSDQPISV
AATASGVGNPWFSASDGNSALHTSAFPSSPTDSSPFTPTPEGQVLDTSSSASGSALFPDS
QEGVDQEWDRVQTSASGESALPYSTKVTNTVPPSTASESGQTPDDLDDRSSAFYFESESG
SAITSEVGSTAAPATPAVTSASPWSLGGEEESGSGQGESPYDNETSSDFSISERTERDSE
EEDLIADSSSISRESRVGSIRERERKAVVPLAVISTLTVVGLIVLISILVYWRTCFQTAH
FYIDDSSSPRVIAAPSTAALTSDKETTFPVRDFVKHVAELHDTQGFQREFEILKESYEEV
QACTVDMGMTTDNSNHPDNKTKNRYSNILAYDHSRVRLSSQADKDGKTRDYINANYVDGF
KKTRSYIAAQGPLRSSTEDFWRMIWEQNVGVIVMITNLVEKGRRKCDQYWPTEVQEEYGS
FLVTVKSSRVLAYYTQRTFTIRNTHAKKGSQKGQSNERTLMHYHYTHWPDMGVPDFALPL
LSFVRNSSGARTDSMGPVVVHCSAGVGRTGTYIVLDSMLKQMRDEGTVNVMGFLKHIRTQ
RNYLVQTEEQYVFIHDALVEAILSGETEVVAAHLYRYVDELLTPGPAGRTRLDKQFKLVC
HSGVKQCDYSAALQDYNRSKNRNCSVIPVERSRVRLSTSAGETSDYINASYIAGYRQNSE
FIITQNPLPSTVKDFWRMIWDHNAQVIVSLPGSPSSGMEEEAEGLCVFWPHKGQPISYEM
FTVTQRSEEHICMTNEDMLVVQEYVLEATQDDYVLEVKHYRTPHWPNPDSPISNTFELLN
LVKEQSTAKDGPTVVHDDVGGVTAGTFCVLLSLTRQLEAEGSVDVFQVAKLTNLMRPGIF
SDIEQYQFLYRAMLSLIGTQEDEKTLQSDNNGTIVVGTASTAESLESLV
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagaggctgctgtctgctgctggctgctctgctcatcctcctctgccaacga
gctgacggatatgcttacaggaatcaacgcaagttctctgaagacatcgactggtcgtac
gcaggaacattaaaccaaaacaactgggccaagaagtttccatcttgtagcaacgccaag
cagtctcccatcaacatcgaggagaacctggcccaggtgaagttacagtaccagaagttg
cagtttgaaggctgggagagtctgacaggcgacaggacgaccatcaagaacaacggaaag
accgtggcggtggatgtggatggagagttttacatcagtggaggaggcctcaggtcaaag
ttcaaggtcggacgtatcaccttccactgggggcgctgcaacacctcttcagatggctcc
gaacacagtctggacggagtcaaataccctctggagatgcagatctactgttatgagtct
cagcgctttgactctttagatgaaaccatcaaggccggaggcagaatcacagcactcgct
gtgctgtttgagacgaatagtgaagacaatgcaaactatgtggccatcgtagacagtatc
ctcagtgtgagcagatacggaaaaagtgcagaggttttgcccttcaccctccgaggtctc
ctgccaaattccacagagaaatatttcatctacaacggctctctgaccacaccgccctgc
agtgagatcgtagagtggatcgtcttcaagaacacagtggccatctctgatgaacagctg
gagatgttctgcgaggtgatgacgatgcagcaggctggatacgtgatgctaatggactac
ctgcagaacaattacagagagcagcaggagcagttcatgggacaggtgttctcctcatac
accggcactgaggaggtcctcataccagtctgcagttctgagccagagaacatccaggcg
gtgccctacaacctcagcagcctactggtgacgtgggagcggccacgggcggtgtacgat
gccagcattgagaaatattctgtcagctatcgactggccaacgtggaaaactctgtccct
gctgaatacctaacagatggagaccaggatgtgggggcgatactcgatgatcttctagcc
aacagcagctatgtggtccaggtggtggcagtctgcaccaacgggctgtacggacgtgtg
agcgacctgctgacggttgtcatgcccgccgacgaccctgaaaatgtactggatcctcat
tcagatgaatttgatgatgagggcaactatgaacccgatctgccctggaatgaacctgtc
caaactgaggattacaatttagcctgggttcctagaaactcaccaagaaccacgacttct
ggatcaaaccttttacctctacctggcatcagaaccacaacagcagaaccaagtcagaga
agaaccagcactgatccgctaccccctgccagatccactcattctggtcatgtcctgagc
cagttggaagagacaacaccccacagttcctccacacagccaccagaggtcaccctgcta
ccagaaaccagaaaagaagcggacttcagtggcaatgctcccttttactccacaacaacg
tcaacaacaacaaccaccaagggattcttcatttccacttccactactcctatatactcc
aacacaaagacagatggtgttcttggaggcatcggaccaataggtggtgccagcaccact
acatcgacaatcgcaaagacaaaagatggtaaaggtatttcctcatacagcaccaccacg
accacactaaggtctcacaccagacacgcaagcagcacgacaccatcatcattcttcatc
caggctgagattgacagaggcctggcgcagcccagagatgaagacaccactgctgaacgt
ggaggacttctagagatccaaccttcaacctcccaaccttcttcatcaagtgaagctgtt
ccaagtagtcccacaagtcccagcatgcctcatttttcatcttccacgacctctgtccgg
ttgagtgccgttctcttgcagacatccaagccactgtccaacggtgagagcccctctgtc
ctcccctcctcttcctcctcctccttcgtctcctcccctctgtgtgacaacatggaccca
gacaccgccccctccacctgcctgcatgacccttcttcctcgtcttggcctttgttgtct
gcctctgctccggactcccagcatgccgctatcgcactgttgtctagcaaagacctggct
tctccttcaacccccacgctcactgcctccaccctgcctcacctccctcacccttcacac
cctctgtctggttgggagactgaccccgtcttccctggtgtcgggttcgacgataatgat
agcgatggtgatatgttgtctgggtcttcatcttcgtcggtttcttcaggtgacccctta
gtgtttagtgatacccctcctctccaaacaatgcctgatccgtctggcaccactgtcgct
gctgagccgtccgaatcctcctgggatccgttgctctcaacagtctctctgtctctcagc
cccaccctccagccttcagttctcctttctagtgacgtcatcctttccggtgcaactcca
ggcttataccgctctttctcagctgggtttgaggactccaggtacgccacaggaagcaca
atagagtcttttctccctgaggttgctggtgatgggttttcattagctagcgatgtggat
accatgtgtggctgttctctggagccgtcagcatcctcgtcctggttgcatgcctctcct
catgtccccctgccatcctcagcctgggactctgctagcttagagctttactctagtgtt
ggcgtcctttcggcctctggtgttggtatagacaaccttctacactctctatctgtggcg
ggttctgatggtctgtccttagaccagcctctgctctcccatagcaacatctccccctca
atgtcctctctgcactcccaccttctccaagccacccatagtgaccagcccatttctgtt
gcagccacagcgtctggcgtcgggaatccctggttctctgcgtcagatgggaactccgcc
ctccatacctctgccttcccttcctcacccacagactcctccccttttacccccacccca
gaaggacaggtgttagacactagcagcagtgcctctggctcggccctgttccctgactcc
caggagggtgtagatcaggagtgggacagggttcaaacctcagcctcgggggagagcgca
ctcccttattcaaccaaagtcacaaacaccgttcccccatctacagcctctgagtctggc
cagaccccagatgatttggacgatcgctcctcagcattctattttgaaagcgagagcggc
agtgccatcacctcagaggtgggaagcactgcagctccagccactcctgcagtaacctcg
gcttcaccctggtcactgggtggggaggaggagagcggctcagggcagggtgaaagcccg
tacgacaacgagacgtcctctgacttcagtatctccgagcgcacagaaagagactcagag
gaagaggacctaattgcagactccagcagcatcagccgcgagtcgagggtcggttcgatc
agggaacgagagaggaaggctgtggttcctctggctgtcatctccaccctcaccgtcgtc
ggcctcatcgtcctcatcagcatcctcgtctactggaggacctgttttcagacagctcat
ttctacatcgacgacagctcctcacccagagtcatcgctgctccgtccacagctgcatta
acatctgataaggagactactttcccagtgagggactttgtcaaacatgttgctgaactt
cacgacactcagggcttccagagagagtttgagatactgaaggagagctacgaggaggtt
caggcatgcacggtggacatggggatgacgactgacaactccaaccatcctgacaacaag
actaaaaacagatacagcaacatcctggcctatgaccacagtagagtgcggctctcgtct
caggctgataaagacggaaagaccagagattacatcaatgcaaactacgtggatggtttt
aaaaagaccaggtcgtacatcgcagcccagggtcctctcaggtcaagcactgaagatttc
tggaggatgatctgggagcaaaatgttggcgtcatcgtcatgatcacgaacctggtggag
aaaggacgaaggaagtgtgatcagtactggccaacagaggtgcaggaggagtacggcagc
ttcctggtgacggtgaaaagcagtagagtcctcgcctattacacccagaggacattcacc
atcaggaacacccacgccaaaaagggctcccagaaaggacagagcaatgaacggacactg
atgcactaccattacacccactggcccgacatgggcgtcccagatttcgcgctgccgctg
ctcagcttcgtccgcaattcatccggggcccggacggacagcatggggccagtggtggta
cactgcagtgcgggtgtgggccggacgggaacctacatcgtcctggacagcatgctgaag
cagatgagagacgaaggcaccgtcaacgtcatgggcttcctcaaacacatccgcacacag
aggaactacctggtccagacagaggaacagtatgtttttatacatgatgctttggtggaa
gccatcttgtctggggagacggaggtggtggcagctcacctgtacagatatgtggacgag
ctgctgaccccagggcctgctgggaggacacgcctggacaaacagtttaagctggtttgt
cattctggagtgaagcagtgcgactactctgcagctctgcaggactacaaccgcagcaag
aacagaaactgctctgtgataccagttgagaggtcacgagtgcgtctgtcaacgtcagcg
ggggaaacgtcggactacataaacgcatcgtacattgcgggttacaggcagaacagtgag
ttcatcattacccagaatcctctgccaagcacagtaaaggacttctggaggatgatatgg
gaccacaatgcccaggtcattgtgtcgctgccggggtcaccatcgagtgggatggaggag
gaggcagaggggctatgtgtcttctggccgcacaaggggcagccaatcagctacgagatg
ttcacagtcacgcagaggagcgaggaacacatctgtatgaccaatgaggacatgttggtg
gttcaggagtatgtactggaagccacacaggatgattacgttctggaggtgaaacattac
cgcactccccactggccaaacccagacagtcccatcagcaacacctttgaactgttaaac
ctggtgaaagaacagagcactgccaaggacggccctactgtcgtccatgatgatgtgggt
ggagtcacagcagggacattctgtgttctgctatctctgactcgccagctggaggctgaa
gggtcagttgacgtcttccaagtggccaaattgacaaacctcatgagaccaggaatattc
agcgacattgagcagtatcagtttctgtacagagccatgctgagtctcattgggacgcaa
gaagatgagaaaaccctccagtccgacaacaacggcactatcgtggtgggaactgccagc
acagcagagagccttgaatccctggtgtaa
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integrated database retrieval system