KEGG   Lates calcarifer (barramundi perch): 108902903
Entry
108902903         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase zeta
  KO
K08114  receptor-type tyrosine-protein phosphatase zeta [EC:3.1.3.48]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcf01009]
    108902903
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lcf00535]
    108902903
Enzymes [BR:lcf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.48  protein-tyrosine-phosphatase
     108902903
Protein phosphatases and associated proteins [BR:lcf01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Receptor PTPs
    108902903
Proteoglycans [BR:lcf00535]
 Cell surface proteoglycans
  Others
   108902903
SSDB
Motif
Pfam: Y_phosphatase Carb_anhydrase fn3 Y_phosphatase3 PTPlike_phytase DSPc GUN4_N
Other DBs
NCBI-GeneID: 108902903
NCBI-ProteinID: XP_018560432
LinkDB
Position
LG10:complement(1211631..1290524)
AA seq 1909 aa
METRGCCLLLAALLILLCQRADGYAYRNQRKFSEDIDWSYAGTLNQNNWAKKFPSCSNAK
QSPINIEENLAQVKLQYQKLQFEGWESLTGDRTTIKNNGKTVAVDVDGEFYISGGGLRSK
FKVGRITFHWGRCNTSSDGSEHSLDGVKYPLEMQIYCYESQRFDSLDETIKAGGRITALA
VLFETNSEDNANYVAIVDSILSVSRYGKSAEVLPFTLRGLLPNSTEKYFIYNGSLTTPPC
SEIVEWIVFKNTVAISDEQLEMFCEVMTMQQAGYVMLMDYLQNNYREQQEQFMGQVFSSY
TGTEEVLIPVCSSEPENIQAVPYNLSSLLVTWERPRAVYDASIEKYSVSYRLANVENSVP
AEYLTDGDQDVGAILDDLLANSSYVVQVVAVCTNGLYGRVSDLLTVVMPADDPENVLDPH
SDEFDDEGNYEPDLPWNEPVQTEDYNLAWVPRNSPRTTTSGSNLLPLPGIRTTTAEPSQR
RTSTDPLPPARSTHSGHVLSQLEETTPHSSSTQPPEVTLLPETRKEADFSGNAPFYSTTT
STTTTTKGFFISTSTTPIYSNTKTDGVLGGIGPIGGASTTTSTIAKTKDGKGISSYSTTT
TTLRSHTRHASSTTPSSFFIQAEIDRGLAQPRDEDTTAERGGLLEIQPSTSQPSSSSEAV
PSSPTSPSMPHFSSSTTSVRLSAVLLQTSKPLSNGESPSVLPSSSSSSFVSSPLCDNMDP
DTAPSTCLHDPSSSSWPLLSASAPDSQHAAIALLSSKDLASPSTPTLTASTLPHLPHPSH
PLSGWETDPVFPGVGFDDNDSDGDMLSGSSSSSVSSGDPLVFSDTPPLQTMPDPSGTTVA
AEPSESSWDPLLSTVSLSLSPTLQPSVLLSSDVILSGATPGLYRSFSAGFEDSRYATGST
IESFLPEVAGDGFSLASDVDTMCGCSLEPSASSSWLHASPHVPLPSSAWDSASLELYSSV
GVLSASGVGIDNLLHSLSVAGSDGLSLDQPLLSHSNISPSMSSLHSHLLQATHSDQPISV
AATASGVGNPWFSASDGNSALHTSAFPSSPTDSSPFTPTPEGQVLDTSSSASGSALFPDS
QEGVDQEWDRVQTSASGESALPYSTKVTNTVPPSTASESGQTPDDLDDRSSAFYFESESG
SAITSEVGSTAAPATPAVTSASPWSLGGEEESGSGQGESPYDNETSSDFSISERTERDSE
EEDLIADSSSISRESRVGSIRERERKAVVPLAVISTLTVVGLIVLISILVYWRTCFQTAH
FYIDDSSSPRVIAAPSTAALTSDKETTFPVRDFVKHVAELHDTQGFQREFEILKESYEEV
QACTVDMGMTTDNSNHPDNKTKNRYSNILAYDHSRVRLSSQADKDGKTRDYINANYVDGF
KKTRSYIAAQGPLRSSTEDFWRMIWEQNVGVIVMITNLVEKGRRKCDQYWPTEVQEEYGS
FLVTVKSSRVLAYYTQRTFTIRNTHAKKGSQKGQSNERTLMHYHYTHWPDMGVPDFALPL
LSFVRNSSGARTDSMGPVVVHCSAGVGRTGTYIVLDSMLKQMRDEGTVNVMGFLKHIRTQ
RNYLVQTEEQYVFIHDALVEAILSGETEVVAAHLYRYVDELLTPGPAGRTRLDKQFKLVC
HSGVKQCDYSAALQDYNRSKNRNCSVIPVERSRVRLSTSAGETSDYINASYIAGYRQNSE
FIITQNPLPSTVKDFWRMIWDHNAQVIVSLPGSPSSGMEEEAEGLCVFWPHKGQPISYEM
FTVTQRSEEHICMTNEDMLVVQEYVLEATQDDYVLEVKHYRTPHWPNPDSPISNTFELLN
LVKEQSTAKDGPTVVHDDVGGVTAGTFCVLLSLTRQLEAEGSVDVFQVAKLTNLMRPGIF
SDIEQYQFLYRAMLSLIGTQEDEKTLQSDNNGTIVVGTASTAESLESLV
NT seq 5730 nt   +upstreamnt  +downstreamnt
atggagaccagaggctgctgtctgctgctggctgctctgctcatcctcctctgccaacga
gctgacggatatgcttacaggaatcaacgcaagttctctgaagacatcgactggtcgtac
gcaggaacattaaaccaaaacaactgggccaagaagtttccatcttgtagcaacgccaag
cagtctcccatcaacatcgaggagaacctggcccaggtgaagttacagtaccagaagttg
cagtttgaaggctgggagagtctgacaggcgacaggacgaccatcaagaacaacggaaag
accgtggcggtggatgtggatggagagttttacatcagtggaggaggcctcaggtcaaag
ttcaaggtcggacgtatcaccttccactgggggcgctgcaacacctcttcagatggctcc
gaacacagtctggacggagtcaaataccctctggagatgcagatctactgttatgagtct
cagcgctttgactctttagatgaaaccatcaaggccggaggcagaatcacagcactcgct
gtgctgtttgagacgaatagtgaagacaatgcaaactatgtggccatcgtagacagtatc
ctcagtgtgagcagatacggaaaaagtgcagaggttttgcccttcaccctccgaggtctc
ctgccaaattccacagagaaatatttcatctacaacggctctctgaccacaccgccctgc
agtgagatcgtagagtggatcgtcttcaagaacacagtggccatctctgatgaacagctg
gagatgttctgcgaggtgatgacgatgcagcaggctggatacgtgatgctaatggactac
ctgcagaacaattacagagagcagcaggagcagttcatgggacaggtgttctcctcatac
accggcactgaggaggtcctcataccagtctgcagttctgagccagagaacatccaggcg
gtgccctacaacctcagcagcctactggtgacgtgggagcggccacgggcggtgtacgat
gccagcattgagaaatattctgtcagctatcgactggccaacgtggaaaactctgtccct
gctgaatacctaacagatggagaccaggatgtgggggcgatactcgatgatcttctagcc
aacagcagctatgtggtccaggtggtggcagtctgcaccaacgggctgtacggacgtgtg
agcgacctgctgacggttgtcatgcccgccgacgaccctgaaaatgtactggatcctcat
tcagatgaatttgatgatgagggcaactatgaacccgatctgccctggaatgaacctgtc
caaactgaggattacaatttagcctgggttcctagaaactcaccaagaaccacgacttct
ggatcaaaccttttacctctacctggcatcagaaccacaacagcagaaccaagtcagaga
agaaccagcactgatccgctaccccctgccagatccactcattctggtcatgtcctgagc
cagttggaagagacaacaccccacagttcctccacacagccaccagaggtcaccctgcta
ccagaaaccagaaaagaagcggacttcagtggcaatgctcccttttactccacaacaacg
tcaacaacaacaaccaccaagggattcttcatttccacttccactactcctatatactcc
aacacaaagacagatggtgttcttggaggcatcggaccaataggtggtgccagcaccact
acatcgacaatcgcaaagacaaaagatggtaaaggtatttcctcatacagcaccaccacg
accacactaaggtctcacaccagacacgcaagcagcacgacaccatcatcattcttcatc
caggctgagattgacagaggcctggcgcagcccagagatgaagacaccactgctgaacgt
ggaggacttctagagatccaaccttcaacctcccaaccttcttcatcaagtgaagctgtt
ccaagtagtcccacaagtcccagcatgcctcatttttcatcttccacgacctctgtccgg
ttgagtgccgttctcttgcagacatccaagccactgtccaacggtgagagcccctctgtc
ctcccctcctcttcctcctcctccttcgtctcctcccctctgtgtgacaacatggaccca
gacaccgccccctccacctgcctgcatgacccttcttcctcgtcttggcctttgttgtct
gcctctgctccggactcccagcatgccgctatcgcactgttgtctagcaaagacctggct
tctccttcaacccccacgctcactgcctccaccctgcctcacctccctcacccttcacac
cctctgtctggttgggagactgaccccgtcttccctggtgtcgggttcgacgataatgat
agcgatggtgatatgttgtctgggtcttcatcttcgtcggtttcttcaggtgacccctta
gtgtttagtgatacccctcctctccaaacaatgcctgatccgtctggcaccactgtcgct
gctgagccgtccgaatcctcctgggatccgttgctctcaacagtctctctgtctctcagc
cccaccctccagccttcagttctcctttctagtgacgtcatcctttccggtgcaactcca
ggcttataccgctctttctcagctgggtttgaggactccaggtacgccacaggaagcaca
atagagtcttttctccctgaggttgctggtgatgggttttcattagctagcgatgtggat
accatgtgtggctgttctctggagccgtcagcatcctcgtcctggttgcatgcctctcct
catgtccccctgccatcctcagcctgggactctgctagcttagagctttactctagtgtt
ggcgtcctttcggcctctggtgttggtatagacaaccttctacactctctatctgtggcg
ggttctgatggtctgtccttagaccagcctctgctctcccatagcaacatctccccctca
atgtcctctctgcactcccaccttctccaagccacccatagtgaccagcccatttctgtt
gcagccacagcgtctggcgtcgggaatccctggttctctgcgtcagatgggaactccgcc
ctccatacctctgccttcccttcctcacccacagactcctccccttttacccccacccca
gaaggacaggtgttagacactagcagcagtgcctctggctcggccctgttccctgactcc
caggagggtgtagatcaggagtgggacagggttcaaacctcagcctcgggggagagcgca
ctcccttattcaaccaaagtcacaaacaccgttcccccatctacagcctctgagtctggc
cagaccccagatgatttggacgatcgctcctcagcattctattttgaaagcgagagcggc
agtgccatcacctcagaggtgggaagcactgcagctccagccactcctgcagtaacctcg
gcttcaccctggtcactgggtggggaggaggagagcggctcagggcagggtgaaagcccg
tacgacaacgagacgtcctctgacttcagtatctccgagcgcacagaaagagactcagag
gaagaggacctaattgcagactccagcagcatcagccgcgagtcgagggtcggttcgatc
agggaacgagagaggaaggctgtggttcctctggctgtcatctccaccctcaccgtcgtc
ggcctcatcgtcctcatcagcatcctcgtctactggaggacctgttttcagacagctcat
ttctacatcgacgacagctcctcacccagagtcatcgctgctccgtccacagctgcatta
acatctgataaggagactactttcccagtgagggactttgtcaaacatgttgctgaactt
cacgacactcagggcttccagagagagtttgagatactgaaggagagctacgaggaggtt
caggcatgcacggtggacatggggatgacgactgacaactccaaccatcctgacaacaag
actaaaaacagatacagcaacatcctggcctatgaccacagtagagtgcggctctcgtct
caggctgataaagacggaaagaccagagattacatcaatgcaaactacgtggatggtttt
aaaaagaccaggtcgtacatcgcagcccagggtcctctcaggtcaagcactgaagatttc
tggaggatgatctgggagcaaaatgttggcgtcatcgtcatgatcacgaacctggtggag
aaaggacgaaggaagtgtgatcagtactggccaacagaggtgcaggaggagtacggcagc
ttcctggtgacggtgaaaagcagtagagtcctcgcctattacacccagaggacattcacc
atcaggaacacccacgccaaaaagggctcccagaaaggacagagcaatgaacggacactg
atgcactaccattacacccactggcccgacatgggcgtcccagatttcgcgctgccgctg
ctcagcttcgtccgcaattcatccggggcccggacggacagcatggggccagtggtggta
cactgcagtgcgggtgtgggccggacgggaacctacatcgtcctggacagcatgctgaag
cagatgagagacgaaggcaccgtcaacgtcatgggcttcctcaaacacatccgcacacag
aggaactacctggtccagacagaggaacagtatgtttttatacatgatgctttggtggaa
gccatcttgtctggggagacggaggtggtggcagctcacctgtacagatatgtggacgag
ctgctgaccccagggcctgctgggaggacacgcctggacaaacagtttaagctggtttgt
cattctggagtgaagcagtgcgactactctgcagctctgcaggactacaaccgcagcaag
aacagaaactgctctgtgataccagttgagaggtcacgagtgcgtctgtcaacgtcagcg
ggggaaacgtcggactacataaacgcatcgtacattgcgggttacaggcagaacagtgag
ttcatcattacccagaatcctctgccaagcacagtaaaggacttctggaggatgatatgg
gaccacaatgcccaggtcattgtgtcgctgccggggtcaccatcgagtgggatggaggag
gaggcagaggggctatgtgtcttctggccgcacaaggggcagccaatcagctacgagatg
ttcacagtcacgcagaggagcgaggaacacatctgtatgaccaatgaggacatgttggtg
gttcaggagtatgtactggaagccacacaggatgattacgttctggaggtgaaacattac
cgcactccccactggccaaacccagacagtcccatcagcaacacctttgaactgttaaac
ctggtgaaagaacagagcactgccaaggacggccctactgtcgtccatgatgatgtgggt
ggagtcacagcagggacattctgtgttctgctatctctgactcgccagctggaggctgaa
gggtcagttgacgtcttccaagtggccaaattgacaaacctcatgagaccaggaatattc
agcgacattgagcagtatcagtttctgtacagagccatgctgagtctcattgggacgcaa
gaagatgagaaaaccctccagtccgacaacaacggcactatcgtggtgggaactgccagc
acagcagagagccttgaatccctggtgtaa

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