Lates calcarifer (barramundi perch): 108903034
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Entry
108903034 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: hyaluronoglucosaminidase 6
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00531
Glycosaminoglycan degradation
lcf01100
Metabolic pathways
lcf04142
Lysosome
Module
lcf_M00076
Dermatan sulfate degradation
lcf_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108903034
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108903034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lcf02042
]
108903034
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108903034
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108903034
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
108903034
Bacterial toxins [BR:
lcf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
108903034
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Enzymes
108903034
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Enzymes
108903034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
DL-JAG_EGF-like
EGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
108903034
NCBI-ProteinID:
XP_018560628
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All DBs
Position
LG10:complement(938827..941463)
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AA seq
502 aa
AA seq
DB search
MVQMGLPLLALALWVAVGVKLQVGGDQVKPSRAPLISHRPFIVVWNAPTESCRLRFKVDL
DLSVFDIVANLNETLSGPNVTIFYHSHLGYYPYYSNSGLPVNGGLPQNQSISKHLSKARA
DIDKLIPHKDFRGLGVIDWENWRPQWVRNWGSKDIYRNKSKEQIRKLHPHWPESKVEKEA
KESFERAGLAFMNLTLALAEGRRPDGLWGFYLFPDCYNYGYKQHPQRYTGECPNIEHVRN
DHLMWLWKESTALYPSIYLDYELKSSPNTVKFVHYRVKEAMRIASIARTDFTLPVFVYSR
PFYAYTFVVLSESDLVHTIGESAALGASGVVLWGSSEYARSQRNCLTVKKYIDGPLGHYV
INVTSAAKLCSKALCKKNGRCVRKSLDSGADLHLNPRFFNIHRNLTPRGPHFHVSGHLNN
HDILDMKHKFTCQCYQGWTGIYCEMPQVPPAPPPPPQPDFPLPHPRENSLLGDILLLLSL
HFSCLCIITFLGLCLIIKCLIL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagatggggctccctctcctggcgctggccttgtgggttgccgttggagtaaag
ctccaagttgggggcgaccaggtgaagccatcccgtgcacctctgatctctcaccggccg
ttcattgtcgtgtggaacgctccaaccgagtcctgccgccttcgatttaaggtggaccta
gacctcagtgtgtttgacattgtagcaaacctcaacgaaaccctcagtggaccgaatgtc
accatattctaccacagccacctgggatactacccgtactactccaattctgggctccct
gttaacggtggactgccacagaaccagagcatctccaaacacctgagcaaagcccgagct
gacattgacaagctgatccctcacaaggatttccgaggcctgggtgtcattgactgggag
aactggaggcctcagtgggtcaggaactggggctccaaggacatctaccgcaacaagtcc
aaggaacagatccggaaacttcacccacactggccggagagtaaggtggagaaagaggcg
aaggagagttttgagagggccgggctggccttcatgaacctgaccttagctctggctgag
ggccgaaggcctgacgggctgtgggggttttatctgttcccagactgctacaactacgga
tacaagcagcacccgcaacggtacactggcgaatgtcccaacatcgagcacgttcgcaac
gaccacctgatgtggctctggaaggaaagcacggccctctacccgtcaatctacctggac
tacgagctcaagtcctcccccaacacagtcaagtttgtccactatcgagtcaaggaagcc
atgaggatcgcgtccattgctcgtacagactttacattgcctgtgtttgtctactccaga
cctttctatgcttacacctttgtggttctttcagagagtgatctggttcataccatcgga
gagagtgccgccttgggagcatcaggtgttgtcctttgggggtcatcagagtacgctcga
tcacagaggaactgtctgacagtgaagaagtacattgacggtccgctgggacattacgtc
atcaacgtcacgtctgctgctaagctgtgtagcaaagctttgtgcaagaagaatggcagg
tgtgtccgcaagagtcttgactcaggtgccgacctgcacctgaaccctcgcttcttcaac
atccaccgcaacctgacgcccaggggcccccacttccacgtcagtggtcacctcaacaac
cacgacatcctggacatgaagcacaagttcacctgccagtgctaccagggttggaccggc
atttactgcgagatgccccaggttccgcctgctcctcctcctccacctcaacctgacttc
cctctgcctcacccccgagagaacagcctgctgggagatatcctgctcctcctatccctc
catttctcctgtctgtgcatcatcacttttctgggactctgtctgattatcaagtgtctg
atactgtag
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