KEGG   Leptothrix cholodnii: Lcho_3505
Entry
Lcho_3505         CDS       T00681                                 
Name
(GenBank) secretion ATPase, PEP-CTERM locus subfamily
  KO
K02450  general secretion pathway protein A
Organism
lch  Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:lch00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lch02044]
    Lcho_3505
Secretion system [BR:lch02044]
 Type II secretion system
  General secretion pathway protein
   Lcho_3505
SSDB
Motif
Pfam: AAA_22 Epimerase_2 AAA_16 AAA_30 SLFN-g3_helicase nSTAND3 TsaE ATPase_2 AAA_19 NACHT cobW AAA_14 TniB Viral_helicase1 AAA_5 NTPase_1 PIF1 AAA_7 Ploopntkinase3 dNK Mg_chelatase T2SSE AAA_23 DUF2170 ABC_tran KAP_NTPase AAA_33 AAA_29 DnaB_C NB-ARC Herpes_Helicase
Other DBs
NCBI-ProteinID: ACB35759
UniProt: B1Y3Q6
LinkDB
Position
complement(3916740..3919235)
AA seq 831 aa
MYESYFGFHGQPFQLNPDPAFFFNSRGHGRALAYLQYGVTQSEGFIVITGEIGAGKTTLV
RMLLEGLDRQKVLPAQIVSTQLESGELLQAIITAFGIPSQGTSKAHLIATLEAFLTALAA
QGRHALLIVDEAQNLDPRAVEELRMLSNFQLGNKALLQSFLVGQPELRRLLESPSMEQLR
QRVTASYHLGPLGIEETQGYVQHRLKHVGWSGRPSFDEGAFDSLFRWTGGVPRRINRLCN
RVLLASFLDGTDVVNEALVERTALELREEIGESDFTPSVVPQRAPAAPVVAPRTVEPEPI
AAPAVDPQPESVAVPEEAAAADSTLADMAVEAAELATLTDADPLLVEPVGDDLLEDVDAL
LAVSARQLAVIAARVQADSALDLESVAKRVMLEQPVAPLPAIAVERTQRAGMPPRSGVVL
CVADTASAALKFAALAKRMAEQAGAARMVLVNPGVKATVWPWEQMERLLPSLEIGLHLGA
PAGADLERVLPLIFERFGRVLDEFNPLAVLTLGDGDALLASALCARRRHVPLIRVEAGLH
HASARPSINGALLDQIADLLFASARPGVLRGLQRQGIAAERVYSIPGLLQVDALAAVWKE
VSTAYGAFMRHGLPIYLGPTWSEHAGAGTPYVLCGLTFDPNDPAAIADAVSTVLSLPQTD
KVVWILDRCATPALRLLLADRPELAGPVVLVEGDGPRGAEMREQMDQARVLCREVDVLPD
QLSMLRGASWALLEPGQVLVDAADLLNVPTLLDINGRLVPADAIAGMVSDGDDHGADPRD
AVSAWIAGIEPGTVRESLADGGGAVEVLQTHLCGWIGRQQAAVPAPVAVAA
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgtacgagtcctacttcggtttccacgggcaaccgtttcagctcaatcccgatccggcg
ttcttcttcaacagccggggtcacggtcgggcgctcgcttatctgcagtacggcgtcacc
cagtcggagggcttcatcgtcatcaccggcgagatcggtgccggcaagacgaccctggtc
cgcatgctgctcgaggggctcgaccgccagaaggtcctgcctgcccagatcgttagcacg
cagctcgagtccggggagttgctgcaggccatcatcaccgcgttcggcatcccgtcgcag
gggacatcgaaggcgcacctgatcgccacgctcgaagccttcctgaccgcgctggccgca
cagggccggcatgccttgctgatcgtcgacgaggcccagaatctggatccacgcgcggtc
gaggagctgcgcatgctgtcgaacttccagctcggcaacaaggcgctgctgcagagtttc
ctggtcggccagcccgagttgcgccgcctgctcgaatcgccgtcgatggagcagttgcgc
cagcgtgtcacggcctcctatcacctcgggccgctcggcatcgaagaaacacaaggctat
gttcagcaccgcctcaagcacgtgggctggagtggccggccctcgttcgacgagggtgct
ttcgacagcctcttccgctggacggggggcgtgccgcgccgcatcaaccggctgtgcaac
cgtgtcctcctggccagctttctggatggcaccgatgtcgtgaacgaggcgctggtcgaa
cgcacggcacttgaactgcgcgaggaaatcggcgaatccgacttcacgccgtcggtcgtt
ccgcagcgtgcgcctgccgcgccggtcgttgcaccacggaccgtcgagcctgaaccgatt
gccgcgccggctgtcgatccgcagcccgagtcggtagccgtgcccgaggaggccgctgct
gccgattcgacactcgccgacatggctgtcgaggcagccgagctggcgacgttgaccgac
gcggatcccctgctggtcgaaccggtcggcgacgatctgctcgaagatgtcgacgccttg
ctggcggtttcggcgcgtcagctggcggtgatcgccgcacgggtccaggccgattccgcg
ctggatctcgaatcggtcgcgaagcgggtgatgctggaacagccggtcgcgccgctgccc
gccatcgcggtcgagcgcacccagagagccgggatgccgcctcgatccggcgtggttctt
tgtgtcgccgacacggccagcgcggcgctcaagttcgcggccctggccaagcgcatggcc
gagcaggccggcgctgcgcgcatggtgctggtcaatccgggtgtcaaggcgacggtctgg
ccctgggagcagatggagcgtctgctgccgtcacttgaaatcggcctgcacctcggagcg
cctgccggtgccgacctcgagcgtgttctgccgctgatcttcgagcgtttcgggcgtgtc
ctggatgaattcaacccgctcgcggtgctgaccctgggtgacggtgatgccctgctggcc
agcgccctgtgcgcccgacgtcggcatgtcccgttgatccgtgtcgaggccgggctgcac
catgccagcgcccggccgtcgatcaatggcgccttgctcgaccagatcgccgacctgctg
tttgccagcgcccgaccgggtgtcctgcgtggcctgcagcgccaaggcatcgccgccgag
cgtgtctacagcatcccgggcctgctgcaggtcgatgccctggccgcggtgtggaaggaa
gtcagcaccgcctatggcgccttcatgcgccacgggctgccgatctacctcgggccgacc
tggtcggagcatgccggagccggcacgccgtacgtgctgtgcgggctgaccttcgatccg
aacgatccggccgcgatcgccgacgccgtgtcgaccgtgctgtccctgccgcagaccgac
aaggtggtctggatcctcgaccgctgcgcgacgcctgccttgcgcctgctgctggccgat
cgccccgaactggccgggccggtggtgctggtcgagggcgacggtccgcgtggtgccgag
atgcgcgagcagatggaccaggcgcgtgtgctgtgccgtgaagtcgatgtgctgcccgat
cagctgagcatgctgcgcggtgccagttgggcgctgctcgagccgggccaggtgctggtg
gatgcggccgatctgctgaacgtgccgacgctgctggacatcaacggccgtctcgtccct
gccgacgccatcgcaggcatggtgagcgacggggatgaccacggtgccgacccgcgcgac
gccgtttcagcctggatcgccggcatcgaacccgggacggtgcgcgagtcgcttgctgac
gggggtggcgcggtcgaggtcctgcagacccatctgtgcggctggatcggccggcagcag
gcggccgtgcccgcgccggtcgcggtcgccgcctga

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