Leptothrix cholodnii: Lcho_3858
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Entry
Lcho_3858 CDS
T00681
Name
(GenBank) peptide chain release factor 3
KO
K02837
peptide chain release factor 3
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lch03012
]
Lcho_3858
Translation factors [BR:
lch03012
]
Prokaryotic type
Release factors
Lcho_3858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
FeoB_N
GTP_EFTU_D4
Roc
Motif
Other DBs
NCBI-ProteinID:
ACB36112
UniProt:
B1Y7G4
LinkDB
All DBs
Position
4324766..4326409
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AA seq
547 aa
AA seq
DB search
MSTDTPDTPPSPLERDIQRRRTFAIISHPDAGKTTLTEKLLLFSGAIQIAGSVKARKASR
HATSDWMEIEKQRGISVASSVMQMEYGDCVINLLDTPGHQDFSEDTYRVLTAVDAALMVV
DAANGVEEQTLRLLKVCRARNTPIITFVNKMDREVKEPLALLDEIEQTLGMSLVPMTWPV
GMGKSFRGVMDLQHDRMRVFKAGADKMENAGDEVVDGLSNPILAERYGLDFQNASGEMEL
LREATPALDREAFLSGRQSPLFFGSAVNNFGVQEVLDALVALAPPPGERQAQERTVQPTE
PKFTGVVFKVQANMDPAHRDRIAFVRVSSGRFQRGMRLKVTRNGKEIRPQTVVSFLSQRR
ELVDDAVAGDIIGIPNHGVLQLGDTLTEGEMLHYTGLPFFAPESFRTVELRDPLRSKQLR
QGLQQLGEEGAIQVFTPVAGGSLMLGAIGQLQFEVVLHRLKGEYGVEARLDPCRFSIARW
ITCADEAKLKKFIDSEPLRIAHDVVGAPAFMVQYSSDLRVTQERVPDIQFHSMREHSGRV
FNAAPSL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacacgcctgacaccccgccatcgccgctcgagcgcgacatccagcgtcgc
cgcaccttcgcgatcatttcccaccccgacgccggcaagaccacgctgaccgagaagctg
ctgctgttctcgggcgcgatccagatcgccggctcggtgaaggcgcgcaaggcgagccgc
cacgcgacgtccgactggatggagatcgagaagcagcgcggtatctcggtggcgtcgtcc
gtcatgcagatggaatacggcgactgcgtcatcaacctgctcgacacccccggccaccag
gatttcagcgaagacacctaccgcgtgctgaccgcggtggatgcggcgctgatggtggtc
gacgccgccaacggcgtcgaggagcagacgctgcgcctgctgaaggtctgccgcgcgcgc
aacacgccgatcatcaccttcgtcaacaagatggaccgcgaggtgaaagagccgctggcg
ctgctcgacgagatcgaacagacgctgggcatgagcctggtgccgatgacctggccggtg
ggcatgggcaagagcttccgcggcgtgatggacctgcagcacgaccgcatgcgcgtcttc
aaggccggcgccgacaagatggaaaacgccggcgacgaggtggtcgacgggttgtccaac
ccgatcctggccgagcgttacgggctggacttccagaacgcatcgggcgaaatggagctg
ctgcgcgaagcgacgccggcactcgatcgcgaggcgtttctctccggcaggcagtcgccg
ctgttcttcggctcggcggtcaacaacttcggcgtgcaggaagtgctcgacgcgctggtg
gcgctggcgccgccgcccggcgagcgccaggcgcaggagcgcacggtgcagccgaccgag
cccaagttcaccggcgtggtgttcaaggtgcaggccaacatggacccggcacaccgcgac
cgcatcgccttcgtgcgcgtgagttcaggccgtttccagcgcggcatgcgcctgaaggtg
acgcgcaacggcaaggagatccgcccgcagacggtggtgagcttcctgtcgcagcgccgc
gaactggtcgacgacgcggtggccggcgacatcatcggcatccccaaccacggcgtgctg
cagctcggcgacacgctgaccgaaggcgagatgctgcactacaccgggctgccgttcttc
gcgcccgagagcttccgcaccgtcgagctgcgcgacccgctgcgcagcaagcagctgcgc
cagggcctgcagcagctgggcgaagaaggcgcgatccaggtcttcaccccggtggccggc
ggctcgctgatgctgggcgcgatcggccagctgcagttcgaggtggtgctgcaccggctc
aagggcgaatacggcgtcgaggcccggctcgacccgtgccgcttctcgatcgcacgctgg
atcacctgcgccgacgaggccaagctcaagaagttcatcgacagcgagccgctgcgcatc
gcccacgacgtggtcggcgcgccggccttcatggtgcagtacagctccgacctgcgggtg
acgcaggagcgcgtgcccgacatccagttccactcgatgcgcgagcactcggggcgggtg
ttcaacgccgcgccgtcgctctga
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