Legionella cherrii: NCTC11976_00313
Help
Entry
NCTC11976_00313 CDS
T06506
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lcj
Legionella cherrii
Pathway
lcj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11976_00313 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcj03019
]
NCTC11976_00313 (pnp)
03016 Transfer RNA biogenesis [BR:
lcj03016
]
NCTC11976_00313 (pnp)
Enzymes [BR:
lcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC11976_00313 (pnp)
Messenger RNA biogenesis [BR:
lcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC11976_00313 (pnp)
Transfer RNA biogenesis [BR:
lcj03016
]
Prokaryotic type
tRNA degradation factors
NCTC11976_00313 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_2
Motif
Other DBs
NCBI-ProteinID:
VEB33328
LinkDB
All DBs
Position
1:complement(358556..360742)
Genome browser
AA seq
728 aa
AA seq
DB search
MAKFTKEIAFGDHTLILETGEIARQADGAVLASMNGTQVLATVVGKKEGAEGNDFFPLTV
NYQEKFYAVGKIPGGFNKREGRPSDNETLISRLIDRPIRPLFPDGFCNEVQVIATVLSLN
PEVSADIVAMVASSAALALSGVPFNGPIGAARVGYKDGIYLLNPSRKDLEQSRLDLVVAG
TKDAILMVESEAKELSEDIMRGAIMFGHEMMKSVIKAIEELAAQGGKPRWEWTPPEVDSH
LQQRVADMVKHEVEAAYLIRDKQERYQRLGELKDQTIAALQAENDELKADVIGSMFVEIE
RATVRNRILDGEPRIDGRDHKTVRPIAIRTKLLERTHGSVLFTRGETQAIVVATLGNERD
AQMLDNIIGETKDRFMLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRAIMAVLPEANEF
PYVLRVVSEITESNGSSSMATVCGTSLALMDAGVPLKAPVAGVAMGLIKEGDRYAVLTDI
LGDEDHLGDMDFKVAGTEQGITALQMDIKIHGITSEIMEQALDQALAGRLHILGVMNNAL
AEHREELSQHAPRITTMKVAEDKIRTIIGKGGATIKGLIDSTGVSIDIDDTGVVQLFSPD
MNALEEAQKQIKALIAEIEVGQTYQGKVSKIVDFGAFINLLPGKDGLLHISQICSDRSQK
VESVLQEGQEIEVFVAGIDKQGRVKLEWKDKPQAEGATDAPVTPAAAEHLEEVHQDAPSV
SDRAGEEE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggctaagtttacaaaagaaatagcatttggtgaccacactcttatattggaaactggt
gaaatagcacgacaagctgatggagcagtattagccagtatgaatggcacccaagtatta
gctacggtagttggtaaaaaagaaggtgcggaaggaaatgattttttcccgctgaccgta
aactatcaagaaaaattttatgcagtgggtaaaatccccggcggatttaacaaacgtgaa
ggtaggccttctgataatgagacattaatttcacgattgatcgatcgccccattcgacct
ttattcccagatggtttttgtaacgaagtccaagttatcgcgacagttctttctttaaat
cctgaagtttccgcagatattgtggcaatggttgcctcttctgcagcgttagcactttct
ggcgtcccttttaatgggccaattggcgctgcacgtgttggttataaggacggtatttac
ctattgaatccgagtcgcaaagacttagagcaatccagactggatttagttgttgccgga
actaaagatgctattttgatggtagagtcagaagcaaaagaattaagcgaagacattatg
cgtggcgcgattatgttcggtcatgaaatgatgaaaagtgtaatcaaggcaatcgaagaa
ctggcagcgcaaggtggtaagccccgttgggaatggacccctccagaagtggatagtcat
ttgcaacaacgagttgctgatatggttaagcatgaggttgaggcagcatacttgattaga
gacaaacaagagcgctaccaacgtttgggtgaattaaaagatcaaacaatcgcagccttg
caagctgaaaatgatgagttaaaggcagatgttattggttctatgtttgttgaaatcgaa
cgtgcgacagtgcgcaatcgaatccttgatggtgagccgcgaattgatggacgcgatcat
aagacagttcgtcctattgcgattcgtacaaaacttttggaaagaacacatggctctgtt
ttatttactcgcggcgaaacacaagcgattgttgttgctactttaggtaatgaacgtgat
gcacaaatgctcgataatattattggagagacaaaagatcgctttatgctgcattacaat
ttccctccctattccgtaggtgagacgggtatggttggcagccccaaacgtagagaaatt
ggacatggtcgcttggccaaacgggcgattatggcggtattaccagaggcaaacgaattt
ccttatgtattaagagtggtctctgaaatcactgaatctaacggctccagctcaatggca
acagtgtgtggtaccagccttgcattgatggatgcaggcgttccattgaaagcccctgtt
gctggggtagcaatgggtttgatcaaagagggagaccggtacgctgtattaacggatata
ttaggtgatgaagaccatttaggtgatatggatttcaaagttgctggaacagaacaggga
attaccgcattacaaatggacattaaaatccacgggataaccagtgaaattatggagcaa
gctctggatcaagctttagctggccgcctgcacattcttggtgtcatgaataatgcatta
gcagagcatagagaagaattatctcaacatgcacctcgaattactactatgaaagttgct
gaagacaagattcgaactattattggtaaaggcggagcaacgattaaaggattgattgat
agcacaggtgtttctatagatattgatgatacaggcgtagttcaattgttttctccagat
atgaatgccttggaagaagcacaaaagcaaattaaagcattaattgccgaaattgaggta
ggtcaaacttatcaaggcaaggtcagtaagattgttgattttggtgcttttattaatctt
ttacctggaaaagacggcttactccatatttctcaaatctgcagtgatcgatctcaaaaa
gttgaatcggtattgcaagaaggccaagagattgaggtctttgttgccggtatcgataaa
caaggtcgtgtgaagcttgagtggaaagataagccccaagcagaaggagcaacagacgct
ccagttacaccagctgcggctgagcatcttgaggaagtacatcaagacgcgcccagtgta
agtgatcgtgcaggcgaagaagagtaa
DBGET
integrated database retrieval system
