Legionella cherrii: NCTC11976_02500
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Entry
NCTC11976_02500 CDS
T06506
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
lcj
Legionella cherrii
Pathway
lcj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11976_02500 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcj03019
]
NCTC11976_02500 (rhlE)
Messenger RNA biogenesis [BR:
lcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11976_02500 (rhlE)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Flavi_DEAD
AAA_11
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
VEB37994
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Position
1:2831848..2833128
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AA seq
426 aa
AA seq
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MSFKSLGLIEPLLQSIDELGYKEPSPIQTQAIPQILSGKDVLASAQTGTGKTASFVLPLL
QKLSSKPRAKSNRTRILILTPTRELASQVHESILQYGRYLSLRSTVVFGGVKINPQMMRL
RSGVELLVATPGRLLDLHQQRAIQFDEIDTLVLDEADRMLDMGFIHDMKRIINLLPKNRQ
NLMFSATFSDEIRNLVKTILNHPVEIDVTPRNTTVVKIKQTVHPVDKSQKAALLSHLIHK
NKWGQTLVFSKTKHGANKLVKQLADAQIHAAAIHGNKSQSQRTKTLAEFKSGELHILVAT
DIAARGIDIDQLPCVVNFDLPQVAEDYVHRIGRTGRAGASGLAISLVSADEVNQLQAIEK
LIQHKLNRIEIEDFEPKHNVPQTNASSKTKNNFPAKTKTTSAPSKFNKKPFAKKIKKNGP
KQSKHA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaagtcactaggtttaatcgagcccttacttcaatccattgatgagttaggc
tataaagaaccctctcctattcaaactcaagcgatcccacagatattatcaggtaaagac
gttcttgcttcggcacaaacaggaacaggtaaaacggcgagtttcgtattacctcttttg
caaaaactgagctcaaaaccacgggctaaaagtaatagaactcgaatcctcattctaact
ccaacacgtgaattagccagtcaagtacatgaaagtatactgcaatatggacgctatcta
tcacttcgttctacagtagtttttggtggagtaaaaatcaacccccaaatgatgaggtta
cgttcgggcgtggaactgttagtcgcgacgccaggacgtttattggatttacatcagcaa
cgcgccatacagtttgatgaaattgatactctagttcttgatgaagccgatagaatgctg
gatatgggctttattcacgacatgaaacgaatcataaatttgctgcctaaaaaccggcaa
aacctcatgttctcagccacgttttctgatgaaattcgaaatctggtaaaaaccattctg
aatcaccctgttgaaattgatgttactcctcgaaacacaaccgtagtgaaaatcaaacaa
acagtacatccagtggataaaagtcaaaaagcggctttattgagccacttaattcataaa
aataaatggggtcagaccttagtgttttcaaaaaccaagcacggcgcaaataaattagtg
aaacaactagccgacgcacaaattcatgcggcagcgatccatggcaataaatctcaatcc
caacggactaagactttagcagaatttaaatcaggtgaattacatattttagtggctaca
gacattgctgcccgcggtattgatattgatcaattgccttgtgtagttaattttgattta
ccccaagttgctgaagattacgtccaccgtattggtcgaacaggccgcgctggcgcttca
ggactggccatttctttagtaagcgctgatgaagtcaatcaattacaagctatagaaaaa
ctgattcagcacaaattaaaccgtattgaaatcgaagattttgagcccaaacacaatgtc
ccccaaaccaatgcctcttctaaaactaaaaataatttcccagctaaaacgaagacaact
tcagcacccagtaaattcaataaaaaaccattcgcaaaaaaaatcaaaaaaaacggtcct
aaacagtctaagcacgcataa
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