Lichenicola cladoniae: HN018_18010
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Entry
HN018_18010 CDS
T07054
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lck03000
]
HN018_18010
Transcription factors [BR:
lck03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HN018_18010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_11
TetR_C_6
TetR_C_43
TetR_C_17
Motif
Other DBs
NCBI-ProteinID:
QKE91673
UniProt:
A0A6M8HT41
LinkDB
All DBs
Position
3977753..3978343
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AA seq
196 aa
AA seq
DB search
MARSPTHNVRERLLDAGVTTFSRSGFHGSSVQDITDAAGVPKGSFYNHFESKEALGVAAL
DQYWSDDAGDRLKILGQPGLAPLERLRHYFERATVDLAAKNYTCGCLAANMTAEISDHSP
AIASQLSAIFATWSSQIADCLGEAQVAGELRPSVDAGMLATFVLNAWEGAVLRARIEKGE
RPLRQFIDVLFTQLLR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggctcgatctccgacgcacaatgtccgtgagcggctcctcgatgccggcgtcacgacc
ttcagcaggtccggcttccacgggtccagcgtccaggacatcacggacgctgcgggcgtg
ccgaaaggctcgttctacaatcatttcgagagcaaggaagcgctcggggtagccgcgttg
gatcagtactggtccgatgatgcaggcgaccggctcaagatcctgggtcagcccggcttg
gcgcctctcgaacgcctcaggcactatttcgaacgggcaaccgtcgatctggcggccaag
aactacacctgcggctgcctggccgcgaacatgaccgccgagatttcggaccatagtccg
gcgatcgccagtcagctttccgccatcttcgcgacctggagcagccagatcgccgattgt
ctcggcgaagcccaggtggccggcgagctccggccatcggtggatgccggcatgctggcg
acgttcgtgctcaatgcctgggaaggtgccgtcctccgcgcccggatcgagaagggcgaa
cgcccgctccggcagttcatcgatgtgctgttcacgcagctcctgcgctaa
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