KEGG   Latimeria chalumnae (coelacanth): 102346929
Entry
102346929         CDS       T02913                                 
Symbol
WDR48
Name
(RefSeq) WD repeat domain 48
  KO
K15361  WD repeat-containing protein 48
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    102346929 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102346929 (WDR48)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     102346929 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 NBCH_WD40 ANAPC4_WD40 WDR54 RAWUL WD40_like Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 102346929
NCBI-ProteinID: XP_006004600
Ensembl: ENSLACG00000007679
UniProt: H3AGB4
LinkDB
Position
Un
AA seq 677 aa
MAAHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVG
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRLLICEEKAPVLKM
ELDRSADPPPAIWVATTKSSVNKWSLKGIHNFRASGDYDNDCSAPLTALCTQQEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVEFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVN
PMDEEENEINHVNGEQENRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKQGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccgacagaacgctgctgggcggagaaaagttcaggtttcttacgtg
attagagatgaagtagaaaaatataaccgcaatggggtaaatgcactacagttggatcca
gcattaaaccggcttttcactgcaggccgggattcaatcatcaggatatggagtgtcggt
cagcacaagcaagacccttatatagcatctatggaacaccacacggactgggtaaatgac
attgtgctttgctgtaatgggaaaacattaatctctgcatcttctgacacaacagtgaaa
gtgtggaatgcacataagggattttgcatgtccacgttacggacacacaaggactacgtg
aaggcattagcttatgcaaaggataaagagctggtggcatctgcaggattggacagacaa
atattcctctgggatgtaaatactcttacagcactgactgcctcaaacaacactgtcact
acttcctccctgagtggaaataaagattccatctacagccttgcaatgaatcagatggga
acagtaattgtttcaggatcaacagaaaaggttctgagagtatgggacccaaggacttgt
gccaagctaatgaaacttaaagggcacacagataatgtcaaagcactgttgctgaacagg
gatggtacacagtgtctctctggtagttctgatggaacaattcgcttgtggtccctgggc
cagcagaggtgtatagcaacatatcgtgtccacgacgaaggggtctgggctttacaggtt
aatgaggccttcactcacgtttactcaggaggaagggacagaaagatttattgtacagac
ctgcggaaccctgatatcaggttgctgatctgtgaagagaaagcccctgttcttaagatg
gagttggacagatctgctgaccctcctccggctatctgggtagccactacaaaatcttca
gtaaacaaatggtctctgaaaggcattcacaattttagagcatcaggggattatgacaat
gattgcagcgctcccttgacagcactgtgtacacaacaagagcaagtcattaaaggaggt
gctagtatcattcagtgccacatactgaatgacaagaggcacatactgaccaaagacaca
aataataatgtggcatactgggatgtactaaaagcatgcaaggtggaagaccttggaaaa
gtagagtttgaagaagaaatcaagaaacggtttaaaatggtgtatgtgccaaactggttc
tcagtagatttaaaaacagggatgttgacaatcactttagatgagagtgattgctttgct
gcctgggtgtcggcaaaggatgctggcttcagcagtccagatggatctgatcctaaatta
aacttaggtggactgttactacaagcccttttagagtattggccaagaacacacgtcaat
ccaatggatgaggaagaaaatgaaattaatcatgttaatggtgaacaggagaatagaatt
cagaaaggaaatggatacttccaggtaccgccacatacacctgtcatctttggtgaagca
ggagggcgaactctgttcaggttgctgtgtcgggattcagggggtgaaactgaatccatg
ctccttaatgaaactgtcccgcagtgggttattgacattactgtagacaaaaacatgccc
aagttcaacaaaatccccttctacctccagcctcactcctcttcgggggcaaagacacta
aaaaaagaccgtctgtcggctagtgacatgttacaggtgagaaaggtgatggagcacgta
tatgagaaaattataaacttagacaacgaatctcagaccacaagctcctccaataatgag
aaacaaggagaacaggagaaagaggaggacattgcggtgttagcagaggagaaaattgaa
ctgctctgccaggatcaggttttggatcccaatatggacctgcgaactgtaaagcacttc
atttggaagagcggtggagatttgactcttcattaccggcaaaaatcgacgtga

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