Latimeria chalumnae (coelacanth): 102347280
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Entry
102347280 CDS
T02913
Symbol
TRIP12
Name
(RefSeq) thyroid hormone receptor interactor 12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102347280 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102347280 (TRIP12)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102347280 (TRIP12)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
HECT type E3
102347280 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
Motif
Other DBs
NCBI-GeneID:
102347280
NCBI-ProteinID:
XP_014350496
Ensembl:
ENSLACG00000009365
LinkDB
All DBs
Position
Un
AA seq
2079 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAGAQPQDNAAGGRLPSEQAKQKTNNPPESKKPSKHKGPKV
QANTTSGQSRGHNSRRGCTSSTTLIPQQEDTDKNSTSERQRPGQTHKRDSSRGLKRRASP
EDSSSSSPSAAKKPKALQHTETSSETNRTKSKKKSQVQDQDKLAQTPSTSKAYSRKGGAA
SGSLNQKRRRSNTSSSVKSGSAADSTGTEERSAKLTKLASKSATSAKAGCSTITGSSSSA
STSSSSSAATTSGSSSVSQGARVKQGKDQSKTRRSRSASSPSPRRSSREKEQNKSGGSSK
FEWPARFSPKVSLPKTKLSLPGSSKSEASKPGPSGLQAKLASLRKSKKRSESPPAELPSL
RRSARQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGANSSAARTDEASPGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQATGDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALTIAANCCQSITPDEFHFVGDSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVAKDLLTNIQQLLVVTPPILSSGMFIMVVRM
FSLMCSNCPTLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVPRSPQELYELTSLICEL
MPCLPKEGIFAVDTMLKKGNTQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTPRAIQRKPNPLANANTSGHSEVKKDDARAQLMKED
PELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHI
ASMLSSQDLKIVVGALQMAEILMQKLPNIFSVYFRREGVMHQVKNLAESEALLTSPPKAC
TSGTGSLGTTTTISTATPTTASNATPDLGSPSFQHSMDDSLDLSPQGRLSDALKRKRLPK
RGPRRPKYSPPRDDDKDNQAKSPTTTSSPKSSFLASLNPKTWGRLSTHTNTNSVEPTRTA
GVSGLARAPPKDTVSNNRMLLEAGAAYYATWSNYSGLKDKIKAWIKEQAHKFVEQYFSSE
NVDASNPALNVLQRLCTATEQLNLQVDGGIECLLEICSIVSESDVSSFEIQHSGFVKQLL
LYLTSKSDKDAVSRDIRLRRFLHVFFGCPIPGEEPVGRLEPLGNGPLLALVHKMNNCLSQ
MEQFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLA
LVQAIERYLVVRGYGRVREDDEDSDDDGSEEEIDESLAAQFLNSGNVRHRLQFYIGDHLL
PYNMTVYQAVRQFSLQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDAVG
GKRGRAQTAPTKTSPRNAKKHDELWHDGLCPAVINPLEVYLISTAPEGITFDDPSLDVIL
LLRVLYAISRYWYYLYDNANCKEIIPTNEFINSKLTAKANRQLQDPLVIMTGNIPIWLTE
LGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTV
NREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLSLWRGE
EITLTNPKGNQEGTKYIHSPQGLFAVPFGRTTKPAHIAKVKMKFRFLGKLMAKAIMDFRL
VDLPLGLPFYKWILRQESSLGSHDLFNIDPVIAKSVRHLEDIVRQKKKLEEDRSQSRECL
QQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVVYWTLNEG
VTRQFESFRDGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDS
RAVKFLFEILSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFL
PSVMTCVNYLKLPDYSSIEIMREKLIMAAREGQQSFHLS
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaatagcaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccacaagacaacgcagcaggaggaaggttaccttcagagcaggcaaaa
caaaagacaaataaccctcctgagagtaaaaaacccagtaaacacaagggaccaaaagta
caggctaacactacttctgggcagtccaggggacacaactctagaaggggctgcacttca
tctactactttgataccacagcaagaggatacagacaaaaatagtacatcagaaagacag
agaccaggacaaacgcataagagagacagttctcgaggtttaaaacgcagggctagtcca
gaagacagcagttccagctctcctagtgctgcaaaaaagcctaaagcacttcaacacaca
gagacttcctcagagacgaacaggacaaagtccaagaaaaaatcccaagtgcaagaccag
gataaattggcccagacaccatcaacaagcaaggcctatagtagaaaaggtggagctgcc
agtggctcccttaatcagaaaaggaggaggagcaatactagttctagtgtgaaaagtggt
tctgcagctgactcaactggtactgaagaaaggtctgcaaaactcaccaagctggcttca
aaatcagcgacctcagccaaagctgggtgtagcacgatcactggctcttcctcttcagcc
tctacatcctcttcctcctctgctgccactacctctggctcctcctctgtttctcaggga
gctcgggtaaagcaaggaaaagaccagagtaagaccagacgttcccgttcagcatccagc
cccagtccccgcaggagcagtcgagaaaaagagcagaataaatctggtggatcctccaaa
tttgagtggcctgctcgcttcagtcctaaagtcagcctccccaaaaccaaactgtctcta
ccggggtcttccaagtcagaggcttcaaaacctggtccttcaggacttcaagctaaatta
gcaagcctgagaaagtcaaagaaacgtagtgagtcaccaccagctgagctccccagttta
cggcggagcgcacgccaaaagaccacgggctcctgtgctagcaccagtcggcgaggctct
ggcctgggcaaaagaggagcagctgaagctcgccgacaggaaaaaatggcagatcctgac
aacaaccaggatggagctaattcttcagctgcacgtacagatgaggcctctccaggagcg
gcagcttctagttctgttgctggggcagtaggaatgacgacttctggagagagcgaatca
gatgattcagaaatgggccgactgcaagctctcttggaagcacgaggccttccacctcac
ctttttggccctcttggtcctcgaatgtcacagctttttcatcgaacaattggcagtggg
gctagttctaaagcccagcaactcctacagggactccaggctactggggatgagagccaa
cagctccaggctgttatagagatgtgtcagttactagttatgggcaatgaagaaacactt
ggaggatttccagtcaagagtgttgtaccagctttgatcactttgctgcagatggagcac
aattttgatattatgaatcatgcctgtagagccctgacctatatgatggaagcacttcca
aggtcctcagctgttgtggtagatgctattccagtcttcctggaaaagttgcaggttatc
cagtgtattgatgtggctgaacaagcattaacggcactggagatgttatcacgcagacat
agtaaagccattctacaggctggaggtttggctgattgcttgctgtatttggagttcttc
agtatcaatgcccagagaaatgccctaactattgctgccaactgttgccagagtatcacc
cctgatgagtttcactttgttggcgattctctgccattacttacccagaggctaacccac
caggacaagaagtctgttgaaagcacatgtttgtgttttgcaagattggtagacaatttc
cagcatgaggagaatttgttgcagcaagtagcaaaggatttgcttaccaatatacagcag
ctcttggtagtgactcctcctatcttgagctcaggaatgttcattatggtagtgcgtatg
ttctccttaatgtgctccaactgtccaactttggctgtgcagctcatgaaacagaatatt
gcagaaacgctccgcttccttctttgtggcgcttcaaatggcagttgtcaggaacagatc
gaccttgtaccacggagccctcaagaactttatgaacttacttcccttatctgtgagttg
atgccatgtttacccaaggaagggatatttgctgtggatactatgctaaagaaaggaaat
actcaaaatacagatggtgcaatatggcagtggcgagatgaccggggtctttggcatcct
tataacagaatagatagccgaataattgaggctgctcatcaagttggtgaagacgagata
agcttgtctacactgggacgtgtttatactattgattttaattctatgcagcaaatcaat
gaggacacgggaacaccacgtgccatacagagaaaacccaatcctttggccaatgctaac
actagtggacattcagaagttaagaaagatgatgcccgggcgcagctaatgaaggaggac
ccagaactggcaaagtgctttataaagacattgtttggtgttctgtatgaggtgtacagt
tcttctgctggaccagcggtcagacacaagtgccttagagcaattcttaggataatttat
tttgctgatgctgaacttttaaaggatgttcttaaaaatcatgctgtatctagtcacatt
gcttccatgctatcgagtcaagatcttaagatagtagtgggagctcttcagatggcagaa
attttaatgcaaaagttacccaacatttttagtgtttactttagaagagaaggtgtgatg
catcaggtaaagaacttagcagagtctgaagctctccttactagtcctccaaaagcatgc
actagtggaacaggaagcctgggcactactacaacaattagcactgcaacacccactaca
gcaagcaatgcaactccagacctgggttctcccagcttccagcacagtatggatgattct
ctggaccttagtccacaagggcgattaagtgatgctttgaaaagaaaacgattgccaaaa
cgtgggccaagaaggccaaagtattctccaccaagagatgatgacaaagacaatcaagct
aaaagtcccacaactacatcatctcctaaatcttccttccttgcaagcttgaatcctaaa
acctggggaagattaagcacacataccaatacaaacagtgttgaaccgacacgcacagca
ggggtcagtggtctggcaagggctcccccaaaagacactgtgtctaataataggatgttg
ttggaagctggagctgcttactatgccacatggtcgaactatagtgggctaaaagataag
attaaggcttggataaaggaacaggcccataaatttgtggagcaatattttagctctgag
aatgtggatgcaagcaatcctgcactgaatgtactacagagactttgcactgctactgaa
cagctcaacttacaggtggatggtggaattgagtgccttttggaaatctgcagcattgtc
tcagagtcagatgtctcctcatttgaaatacagcacagtggttttgtgaaacaattgctg
ctttatttgacctctaaaagtgataaagatgcagttagtagggatatcagattgagaagg
tttcttcatgtcttttttggttgtccaattcctggagaagaacctgttggaagattagag
ccattaggaaatgggccattgttggcacttgtgcacaaaatgaacaactgccttagtcaa
atggagcagttcccagtcaaagtacatgatttcccaagtggaaatggcacagggagtagg
gggtcgcaggccctaaaattcttcaacactcatcagctgaagtgccagctgcagagacat
ccagactgtaccaatgtgaaacaatggaagggtggtcctgtgaagatagatcccttggct
ttggtacaagccattgagagatacctggtagtaagaggttatggaagagtcagagaagat
gatgaagacagtgatgatgatggttcagaagaagaaatagatgaatctttggctgctcag
tttttaaattcagggaatgttcgacacagactacagttttatattggagaccatttgctg
ccatataatatgactgtgtaccaggcagtaaggcagttcagtttacaagctgaagatgag
agggaatccacagatgatgaaagcaatccacttggaagagctgggatctggacaaagacc
catacgatatggtacaaacctgtgcgagaagatgaagatggtaacaaggatgccgttggt
ggaaagagaggtagagcgcaaactgccccaaccaaaacttcaccaagaaatgcaaaaaaa
catgatgagttatggcatgatggtttgtgtcctgcagtaataaatcctttggaagtttac
ctcatatcgactgcaccagaaggtataacatttgatgacccatcactggatgtgattctg
cttctgagagttttgtatgctatcagtcgatactggtattacctgtatgataatgcaaat
tgcaaagagattataccaaccaatgaatttatcaatagtaaactgacagcaaaggccaac
agacagcttcaagatcccctggtgatcatgacgggaaacataccaatttggctgacagag
cttggaaaaacttgccccttcttttttccctttgatacgcggcaaatgctgttctatgtt
actgcatttgatcgggatcgagccatgcaaagattactggacactaatccggaaattaat
cagtctgactctcaagacagcagagttgcaccacgcctggataggaaaaagcgcactgtg
aacagggaggagttgttgaaacaagctgaatctgtaatgcaagacttggggagttcaaga
gcaatgctggagattcagtatgaaaatgaagttggaacaggtctaggccctactttggag
ttttatgcacttgtttctcaggaactacaaagagctgacctgagtctgtggagaggggaa
gaaattaccctgacaaatccaaagggaaaccaagaagggaccaagtatatccatagtcct
caaggcttgtttgctgttccttttggaagaacaactaaaccagctcatatagctaaagtt
aaaatgaagttccgctttttaggaaaattaatggcgaaggccataatggattttagattg
gtggatctgcctcttggcttgccattttataaatggattttgcggcaagaatcatccctt
ggctctcatgatctctttaatattgatccggtaatagccaaatcagtccgtcaccttgag
gatattgtaagacaaaagaagaaactggaggaggaccggtcacagagcagagagtgtttg
cagcaggctttggaaagcttgaacatgaatgggtgttctgttgaggacctgggacttgat
ttcactctgcctgggtttcctaatattgagctaaagaaaggaggaaaggatataccagtc
acaatccacaacctagaagaatatctcagacttgtagtgtactggaccctgaatgaaggt
gttactaggcagtttgaatcattcagagatgggtttgagtctgtcttcccactacatcat
ctgcagtatttctaccctgaggagctagatcagctgctctgtggcagcaagtcagagacc
tgggatgtaaagacattgatggagtgctgtaggccagaccacggatatactcatgacagc
cgagctgtgaagttcttgtttgaaattcttagcagtttcgatgctgaacagcagagacta
tttcttcagtttgttactggtagcccaagactgcctgtaggaggttttcgaagcttgaat
cctccactgacaatagtccgcaagacatttgaatccacagagaatcctgatgactttctg
ccctcagtaatgacctgtgtgaattatctcaagttgccagactattcaagtattgagata
atgcgtgagaaactgataatggctgctagagaggggcagcaatcattccatctttcctga
DBGET
integrated database retrieval system
