Latimeria chalumnae (coelacanth): 102354670
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Entry
102354670 CDS
T02913
Gene name
APAF1
Definition
(RefSeq) apoptotic peptidase activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04115
p53 signaling pathway
lcm04210
Apoptosis
lcm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102354670 (APAF1)
04115 p53 signaling pathway
102354670 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102354670 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NB-ARC
APAF1_C
ANAPC4_WD40
CARD
WD40_like
Ge1_WD40
CARD_2
Nup160
AAA_16
DUF4221
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
102354670
NCBI-ProteinID:
XP_005991378
Ensembl:
ENSLACG00000012823
LinkDB
All DBs
Position
Un
AA seq
1288 aa
AA seq
DB search
MDEKARSCLLRHRAALERDIKTSYIIDHMISDEVLTLEEEQNVKTLSTQRDRGVRLINII
LRKDNYTYISFYNALLHEGYKDLAALLQDCIPIISPLMSNSKDDNTPYVQARLCEGGVPQ
RPVVFVTRMKLIQAIRKEVYKLQDDPGWVTVYGMAGCGKSVLAAEALRDHKFLNTCFPGG
VHWISIGKQDRAGLLVKLQNLCVRLDQDSQASQRPPLNIEEAKDRLRLLMFRKFPRSLLI
LDDVWDSWVLKAFDIQCRVLITTRDIGVTDTVTGKKYTVHVNSGLEHEKALEVLALFVNM
KVSELPTEAHIIVNECKGSPLVVSLIGALLKEFPKRWQYYLKQLQNKQFKRIRKSSSYDY
EALDEAMSISIEVLSEDRKGYYKDLSVLEKDVKVPTKVLCVLWDMETEDVEDILQVFVNK
SLLFCDRNGNSFLYYLHDLQLDFLTEQNRDHLPQLHAKMVNQYQKSYKKCPPAPIEDDCM
YWYNFLAYHMVKANMHKELYSLMFSLDWIKAKTELMGPAHLISEFVQYRHILDEENSTVR
DNFQEFLSLNGHLLVQKPLPDIVQLGLCQPSTSEVYRQARLKAEQKREKRTFYLDWVNKG
ALVSLTRLVVRPHTDTVYHACFSSDGQKIASCGADRTLQILKSETGERLLEINDHDDEVL
CCAFSPDNKLVATCTTDKKVKVWNSETGNLIKTYEEHAEQVNHCEFNNTSEKILLATCSD
DTYLKLWDINEKHCRNTLFGHEGYVNHCLFSPDDHYLASCSNDGTLKLWDVESANEWKSI
DVKELFLESEDNQNDAEVLVKCCSWSSDSARVMAAAKNIIFVFDVETSTLLTEIKMNPHS
TIYYFDFCPRSQMAAVAVSPYSVELWNIESNKRVADLRGHLSWVRSVRFSPDGSTLLSSS
DDQTVRLWETNKVHKSSVVSLKRVLDVLFHGDDVTILAPDNRKQLQLITAGFDTCQSEAQ
DSRVCCCCLSKNRQSAALGHDDGIVKGGIKSAGQALKKIGLWTLQLVTPFHCQFLAVGLE
KGTLKILTLPDFKTIRATEGHKKSVQKCQFTPDGQTLITSSDDATILLWNWQTEDFKVLQ
GHSEQVKNFKLLDNKRLLSWSFDGTVKVWDITSGEVMQDFACHDGAVLCCDVSPNGTMFS
STSADKTAKVWSFSNPVPLYVLEGHKDCVRSCRFSWNSKFLATGDDDGEIRIWKVSNGKL
LNICPKDAGNSTESKHGGWVTDLHFSPDSKILVSTGGYIKWWCVNTGEPLQTFYTNGTNL
KSIHVSPDFKTYVTIDNIGIPYILKMVE
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaaggcacggagctgtttgctgcgacatcgagcggcactggagcgagacatc
aagacttcctacatcattgatcacatgattagtgatgaagtccttactctggaagaggaa
cagaatgtgaagacactatctacacagagagatcggggagtgaggctcattaatataatc
ctgagaaaggataactacacctacatttccttctataacgctctgctccatgaagggtat
aaagaccttgctgctctccttcaagactgcattccgatcatctcccctttaatgtccaac
tcgaaggatgacaatacgccttacgttcaggcacgcctttgtgaaggaggagtacctcag
agaccagttgtgttcgtcacgcggatgaaactgatccaagcaatccgaaaagaggtgtat
aagttgcaggacgatcccggatgggtaactgtatatggaatggcaggctgtgggaagtca
gtgctagcagcagaagcactaagagatcacaagtttttgaacacttgctttcccggagga
gtgcactggatatccattgggaaacaagatcgagcaggactgctggttaaactccagaat
ctctgtgtccggttggatcaggattcccaggcctctcagaggccaccgcttaacatcgag
gaggccaaggaccgccttcgcctactaatgtttcgaaagttcccaaggtctcttctgata
ttggatgacgtttgggatagttgggtattaaaagcctttgacatacagtgtagggtactc
atcaccaccagggacattggtgtgactgatacagttacgggcaaaaaatacacagtccat
gtgaacagtgggctggaacacgagaaagcactggaagtcttagccctttttgtcaatatg
aaagtatcagaactaccaacggaggctcacattatcgttaatgaatgcaaaggatcaccc
ctggtggtttctctcatcggtgcgctgttaaaagagttccccaaacgctggcagtactat
ctcaaacagctccagaataagcaatttaaaagaataagaaagtcctcttcctatgattat
gaggcgctggatgaggcgatgtcaatcagtattgaagtattgagtgaagaccgcaagggg
tattataaagacctgtctgtccttgaaaaggatgtgaaagtcccaaccaaggtgctgtgt
gttctttgggacatggaaactgaagatgtggaagatattctgcaagtgttcgttaataag
tctttactgttctgtgatagaaatggaaattctttcctatattacctacatgatctacaa
ctcgactttctcacagagcagaaccgtgaccaccttccacaacttcatgcaaagatggtt
aatcagtatcagaagtcttacaaaaaatgtcctcctgctcctatcgaagatgattgcatg
tactggtataactttctagcttaccatatggtcaaagccaatatgcacaaggagctgtac
tccctcatgttttctttggattggattaaagcaaaaacggaactaatgggacctgctcat
cttatcagcgaatttgtacaatacagacacattctagatgaagagaatagcaccgtacgt
gataactttcaagagtttctgtctctaaatgggcaccttctggtacagaagccacttcca
gatattgtgcaattgggtctctgccagccgtccacttcagaggtttaccgacaagccaga
ttaaaagctgagcagaaacgggaaaaacgaactttctacctggattgggtaaacaaaggc
gctctggtgagtttgactcgtctagttgtgcgtcctcacacggacactgtttaccatgct
tgcttttcttcagacggacagaagatagcttcttgtggagctgacaggactttgcagatt
ttgaaaagtgagactggagagagacttctcgaaattaatgatcatgacgatgaggttctt
tgctgtgccttctctccagataacaagctcgtagccacttgtacaacagataaaaaagta
aaggtttggaattctgaaactggtaacctgattaaaacctatgaagaacacgcagagcaa
gttaaccactgtgagtttaacaacactagtgaaaaaatcctcctggcgacgtgttccgat
gacacttacctcaaattatgggatataaatgagaagcattgccgcaacaccctgtttggc
catgaggggtacgtcaatcattgtttgttttcccccgatgaccactaccttgccagctgc
tcaaacgatggaacattaaagctttgggatgtggagtctgctaatgaatggaaaagcata
gatgtcaaggaattattcctggagtctgaggataaccagaatgatgcggaggttctggtg
aagtgttgctcctggtcgtctgacagcgccagagtgatggcggccgcaaagaatatcatt
ttcgtttttgatgtggaaaccagcactttgttgacggagattaaaatgaatcctcacagt
acgatctactactttgacttctgtccccgcagtcaaatggcagcagtagctgtgtcaccc
tattctgtggagttatggaacatagaatccaataagagagtggctgacctccgtggacac
ctgagctgggtgcgcagtgtgagattttcacctgacgggtcaacactgctgtcgtcttct
gatgaccagacggttcgactttgggagactaataaagtccacaaatcctcggtcgtgtcc
cttaagcgcgtcctggacgttctgttccacggcgatgatgtaaccatcttagcacctgac
aacagaaagcaacttcagctaattacagctggttttgacacctgtcaaagtgaagctcag
gattctcgcgtctgctgttgctgcctcagtaaaaaccgtcaatcagcagcgttgggacat
gatgatgggattgttaaggggggcattaagtctgccgggcaggctctgaagaaaataggt
ttatggacgctgcaacttgtgacaccttttcattgtcagttcctagctgtagggctagaa
aaaggcacgctaaagattttgacccttcctgattttaaaactatacgtgctacagaggga
cataagaaatctgtacagaaatgtcagtttacaccagacgggcaaaccctcatcaccagc
tctgatgatgcaacaatactgctgtggaactggcagacagaagacttcaaggtgctacaa
ggacactcggagcaagtgaaaaacttcaagctgttagacaataaaagacttctctcctgg
tcctttgacggcacggttaaggtgtgggacattaccagtggtgaagtaatgcaggacttt
gcttgtcatgacggagccgtgctttgctgtgatgtgtctcctaatggtaccatgttttct
tctacctccgctgacaagacggctaaggtctggagttttagcaaccctgtccctctttat
gtactggaaggccacaaagactgtgttcgcagctgcaggttctcatggaatagcaagttc
ctcgctactggagacgacgatggagaaataaggatttggaaggtgagcaatggcaagtta
cttaacatttgcccaaaagacgctggaaattccacagagtcgaagcatggaggctgggtg
acggaccttcacttttctcccgatagcaagattctggtctcaactggaggatacatcaag
tggtggtgtgtgaataccggagaacccttacagaccttctacacaaatggaacaaacttg
aagtcaatacatgtttcccctgactttaagacctacgtcaccattgacaatattgggata
ccttacatcttaaaaatggtggaatga
DBGET
integrated database retrieval system
