KEGG   Latimeria chalumnae (coelacanth): 102356699Help
Entry
102356699         CDS       T02913                                 

Gene name
SETDB1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102356699 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcm03036]
    102356699 (SETDB1)
Enzymes [BR:lcm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102356699 (SETDB1)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102356699 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102356699 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD
Motif
Other DBs
NCBI-GeneID: 102356699
NCBI-ProteinID: XP_014350103
LinkDB All DBs
Position
Un
AA seq 865 aa AA seqDB search
MAEKAFVPVTTVRSWKKHMKEDPLENVELRNHSLRYDLLFKLVVGFAAVLESQLAQNRKQ
VAKKSTSFRPGSAGSGHSSPSSPATSEPPLTNRAVVPQQFRFGMTGLAQQYRGMSDQMPF
EPLYRAPTEKLFYLPHTCCRLCLDRVRPVRRSQYRGRNPQLVPLLYDFRRMTARRRVSRK
MAFHVVYKTPCGLCLRSMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPQKPFYYIQ
DITYGKEDVPLSCVNEIDMSPPPQVAYSKERIPGKGVFINTSAEFLVGCDCTDGCRDKLK
CACHQLTIQATGCTPGAQLNSSAGFQYKRLDECLPTGVYECNKRCKCNFQMCTNRLVQHG
LQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHI
ESVENYKEGYESDAKCSSDSSGVDMKEEEEEEEEEEEENTGSEEAEESNDDSSDDNFCRD
EDFSTSSVWRSYATRRQTRGQKENGTSETASRDSFPQRQASHDESLGSTIKPPISEETSK
NKVASWLSSNSMNPADVRLLLPGEAKPTKLDTSSSLEKPSTSSCVSEKSKDLKRESENTE
MDSSTLKKESGVKESEDQNKFAIGAPRVFGYNPMPTKNEAIRRPLSKTTLLQMRRNSAPT
QPSNDEVMTLSSSSDSEAETGTTTSRKPGVGPVQTAANDSDDIQTISSGSEDSGEKKDSA
PGNSFAGPPKRQVAVKSTRGFALKSTHGIAVKSSNMASAEKGDGTPVRRSTRQFYDGEES
CYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYN
YEVGSVEGKELLCCCGSTECRGRLL
NT seq 2598 nt NT seq  +upstreamnt  +downstreamnt
atggcggagaaggcgttcgttcctgtcaccacagtgcggtcctggaaaaaacacatgaag
gaagatcctttagagaatgttgaactccgaaaccattctctgcgatacgacttactcttt
aaactcgtcgttggatttgcagctgttttggagagccagctagcacagaacagaaagcag
gttgctaagaaaagtacttcatttcgcccgggatcggcgggctcaggacactcctcgccc
tcatcgcccgctacaagtgagccaccacttacaaaccgggctgtggtgcctcagcaattc
aggtttgggatgacaggactggcacagcagtacaggggtatgtcggaccagatgcccttt
gagccattataccgtgctccgactgagaagctgttctacctcccccacacctgctgcagg
ttatgtttggatcgggtccgcccagtcagaaggagtcagtaccgcggcaggaacccacag
ctcgtcccgctgctgtacgacttccgccgtatgacagcccgccgccgtgtcagccggaag
atggccttccatgtggtgtacaagacaccctgcggcctgtgcctgcgcagcatgcaagag
atagagcgctacctcttcgagacaggctgcgacttcctcttcctggagatgttctgcctt
gacccctacgtgctggttgatcgtaaattccagccacagaagcccttttactacatccag
gacatcacctacggcaaggaggatgtccccttgtcctgtgtgaatgagatcgacatgagc
cccccgccacaggtggcctacagcaaagagaggatcccaggcaaaggggtcttcatcaac
accagcgcagagtttctggtgggctgtgattgtacggatggctgcagagacaagttgaag
tgtgcatgtcaccagttgactatccaggcgacaggctgcacgccaggagcacagttgaat
tccagtgctggtttccagtacaagcggctggatgagtgtcttcccacaggggtttatgaa
tgtaacaagcggtgcaaatgcaacttccagatgtgcaccaaccggttggttcaacatggc
ctgcaggtcagactgcagctcttcaaaacccagaacaaaggctgggggatccgctgcctt
gatgacattgccaagggctcctttgtctgcatctatgcaggtaagattcttacagatgat
tttgctgacaaggagggtctggagatgggagacgaatattttgctaacctggatcacatt
gagagcgtagagaattataaggaggggtatgagagtgatgccaagtgttcctcggacagc
agtggggtggacatgaaggaggaagaggaggaggaggaggaagaggaggaggagaacaca
ggcagcgaagaggctgaagaatccaatgacgacagctccgatgacaacttttgccgcgat
gaggattttagcaccagctcagtgtggcgtagctatgccactcgccggcagacccggggc
cagaaggagaatgggacatccgaaacggcctccagggactccttcccccagcgccaggcc
agccacgacgagagcctcggctccaccatcaagccacccatctcagaggagacatccaaa
aacaaagtggcctcgtggctgagctccaacagcatgaatcctgcagacgtcaggctgttg
ctgcctggggaggccaaacccaccaaactggacacctccagcagcctggagaaaccatcc
acttccagctgcgtttcagagaaaagtaaagacctgaagagggaatcggagaacacagag
atggacagcagcaccctcaaaaaagagagtggggttaaggagtcagaggaccagaacaag
tttgcaatcggagctcccagggtatttggttataaccctatgccgacaaaaaatgaagca
attcgcaggccgctcagcaaaaccacgttgctccaaatgcgaagaaactctgcccctacg
cagcccagtaatgatgaagtgatgacgttatccagcagttcggacagcgaggcagaaact
ggcaccaccaccagtcgcaaaccgggggtgggcccagtgcagacggcagccaatgacagt
gacgatattcagaccatttcctcagggtcagaggacagtggggagaagaaggattccgcc
ccaggaaactcctttgcaggtccgcctaaaagacaggttgcggtgaaatccaccagaggt
tttgcacttaaatccacgcacggaattgcagtgaagtcgagcaacatggcatcagcagag
aagggagatggcacaccggtccgaaggagcaccaggcagttttacgatggggaggaatcc
tgctatatcattgacgccaaactggagggaaaccttggccgatatcttaatcatagctgc
agcccgaacctctttgttcagaatgtatttgtcgacacgcatgacctgcgctttccctgg
gtcgctttctttgccagcaagaggatacgtgcgggcacggagctgacgtgggactacaac
tacgaagtgggcagtgtagaagggaaggagctgctctgttgctgtggatccacggagtgc
agaggcagactgctgtaa

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