Latimeria chalumnae (coelacanth): 102357108
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Entry
102357108 CDS
T02913
Name
(RefSeq) blue-sensitive opsin-like
KO
K04252
short wavelength-sensitive opsin
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcm04030
]
102357108
G protein-coupled receptors [BR:
lcm04030
]
Rhodopsin family
Vision
Opsin
102357108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
7TM_GPCR_Srw
7TM_GPCR_Srsx
TAS2R
7tm_4
XRN1_D2_D3
Motif
Other DBs
NCBI-GeneID:
102357108
NCBI-ProteinID:
XP_014347180
Ensembl:
ENSLACG00000010843
LinkDB
All DBs
Position
Un
AA seq
312 aa
AA seq
DB search
MSVFMIFLGFPINALTVFSTLKYKKLRSPLNYILVNLAAGNMLVMMMGSTMAFYSFSQMY
FVLGPTACKIEGFTATLGGMVSLWSLAVVAFERYLVICKPLGNFNFRSTHAIIGCIITWV
FGIIASAPPLLGWSKYIPEGLQCSCGPEWYTVNNKWNNESYVIFLFSFCFGLPLSIIIFS
YTKLLMTLHEVAKQQEQSASTQKAEREVTKMVIVMVLGFLMCWLPYASFALWVITHRGEP
FDLRMASIPSVFSKASTVYNPIIYIFMNKQFRCCIMKLVFCGKSPFGEDDDVSGASQTTT
VSSVSSSQVAPA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcttcatgatcttcctgggttttcccatcaacgcccttaccgtcttcagcacc
ctgaaatacaagaaactccgctcaccactcaactacatcttggttaacctggccgctggc
aatatgctggtgatgatgatggggtccaccatggccttctacagtttctcccagatgtat
tttgtcttgggtcccacagcatgcaaaatcgagggcttcaccgccaccttgggaggtatg
gtaagcctatggtccctggcagtggtggcttttgaaaggtatctggtgatctgcaaacct
ctcggcaactttaattttcgtagcacccatgccatcattggctgcatcatcacctgggtg
tttgggataatcgcctccgcaccccccctcctcggctggagcaagtacattcctgaaggc
ttgcagtgctcctgtggaccagaatggtacacagtcaacaacaaatggaacaatgagtcc
tatgtcatctttctcttctcattctgcttcggattgccactcagcatcatcatcttctcc
tacaccaagctcctgatgaccctgcatgaagttgctaagcaacaggagcaatctgcttct
acccagaaggctgagcgggaggtgacaaagatggtgattgtcatggtattgggattcttg
atgtgctggctgccttatgcttcctttgccctctgggtgatcacccatcgaggggagccc
tttgaccttcgcatggcctccatcccgtcagtcttctccaaagcctccacagtctataac
ccaatcatttacatctttatgaataagcagtttcgctgttgcatcatgaagctcgtcttc
tgtgggaaaagtccctttggcgaggatgacgacgtctcaggagcgtctcagaccaccacg
gtttcctcggtctcatctagtcaggtggcaccagcatag
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