KEGG   Latimeria chalumnae (coelacanth): 102360357Help
Entry
102360357         CDS       T02913                                 

Gene name
WBSCR17
Definition
(RefSeq) Williams-Beuren syndrome chromosome region 17
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm00512  Mucin type O-glycan biosynthesis
lcm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    102360357 (WBSCR17)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:lcm01003]
    102360357 (WBSCR17)
Enzymes [BR:lcm01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     102360357 (WBSCR17)
Glycosyltransferases [BR:lcm01003]
 O-Glycan biosynthesis
  Mucin-type
   102360357 (WBSCR17)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID: 102360357
NCBI-ProteinID: XP_005988597
Ensembl: ENSLACG00000003791
LinkDB All DBs
Position
Un
AA seq 601 aa AA seqDB search
MASLRRVKVLLVLNLVAVAGFVLFLTRCRPINIKAGEPIHGIHSRTDLSNLTTKGSSPMQ
EAVLKRLTLLEDIVYRQLNGLSKSLGLIEGYGGRGRNGLPSTLSPEEEIKAQGPHEKYGY
NAYLSEKISLDRSIPDYRPNKCKELKYPKDLPQISIIFIFVNEALSVILRSVHSAVNHTP
AHLLKEIILVDDNSDDEELKEPLEEYVHKRYPGLVKVVRNQKREGLIRARIEGWKAASGQ
ITGFFDAHVEFTAGWAEPVLSRIQQDRRRIILPSIDNIKQDTFEVQRYENSAHGYSWELW
CMYISPPREWWDEGDPSAPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGIK
VWLCGGSMEVLPCSRIAHIERKKKPYNNNIGFYTKRNALRVAEVWMDDYKSHVYVAWNLP
MENPGIDIGDVSERKALRKRLKCKSFQWYLDNVYPEMRRYNNTIAYGELRNSKAKDICLD
QGPPENHTAIMYPCHGWGPQLARYTKEGYLHLGSLGTTTLLSDTRCLVDNKKSRYPQLLD
CEKVKHIHHKTWHFIQHGAIMNLGTGRCLEIENKSNFVIVVVLRSCTGQKWTIKNFIKQG
R
NT seq 1806 nt NT seq  +upstreamnt  +downstreamnt
atggcttctttgaggagagtgaaagtgttactggtattaaacctggtggcagtggctggg
tttgtgctctttttgactaggtgtagaccaattaatattaaggctggggagccaattcat
ggaatccattccagaacggacctgtccaaccttacaaccaagggctccagtcctatgcag
gaggcagtgctgaaaagactcaccctactcgaggatatagtctacagacagcttaatggt
ctatcaaaatctttgggactcattgaagggtatggtgggcgcggtagaaatggactccct
tccacactctcccctgaggaagagatcaaagcccaaggcccacacgaaaagtatggttac
aatgcatatcttagtgagaagatttcactagaccggtctatcccagattaccgcccaaac
aagtgcaaagagctgaaatacccaaaggatctgcctcagatttctatcatttttattttt
gtgaacgaagccttgtcggtgatcttgcgatcagtacacagtgctgtaaatcacacgccg
gctcacctactcaaggagattatcttggtggatgacaacagtgatgacgaagagttgaag
gagcccttggaggaatatgtgcacaagcgataccctggccttgtgaaggtagttcgcaat
caaaagagagaaggattaatcagagcccgaatcgaaggatggaaagctgcttctggtcag
atcactggattctttgatgcccatgtggaatttactgctggctgggccgagccagttctg
tccagaattcagcaggaccggaggcggattattcttccatcaattgacaacatcaaacag
gatacctttgaggtccagcgttatgagaactcagcacatggctacagctgggaactatgg
tgtatgtacatcagtcctcctagggaatggtgggatgaaggagatccttcggcccccatc
aggacacctgcaatgataggctgctcctttgtggtgaacagaaagttttttggagaaatt
gggctgctggaccctggaatggatgtttatggtggagaaaacatagaactaggaataaag
gtgtggctgtgtggtggaagtatggaggtcctgccatgctcaaggattgctcacattgaa
cgtaagaaaaagccctacaacaacaacattgggttttacacaaagagaaatgctctgcga
gtggctgaagtctggatggacgactacaagtcgcacgtttatgtagcttggaatttaccg
atggagaatccaggaattgatattggcgatgtctctgagaggaaggctcttagaaaaaga
ttgaagtgtaaaagctttcagtggtacttggacaatgtgtacccagaaatgagaagatac
aacaatactattgcttatggagagctccgaaacagcaaagctaaagacatctgccttgac
caaggcccccccgagaatcacacagcaattatgtatccttgtcatggctggggtccacag
cttgcaagatatacaaaggaggggtatctgcatctaggatcccttggaactaccactctg
ctatcagatacccgctgccttgtggataataagaaaagtcgataccctcaacttctggac
tgtgaaaaggttaaacacattcaccacaagacctggcatttcattcagcatggagcaatt
atgaacctgggaactggacgctgcttggaaatagagaataaatcaaactttgtcatcgtg
gttgtcctgcgatcttgtacagggcagaaatggacaattaaaaatttcattaaacaagga
cgataa

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