Latimeria chalumnae (coelacanth): 102361449
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Entry
102361449 CDS
T02913
Symbol
XRCC6
Name
(RefSeq) X-ray repair cross complementing 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102361449 (XRCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102361449 (XRCC6)
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102361449 (XRCC6)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102361449 (XRCC6)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
102361449 (XRCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
SAP
Rho_N
SAP30_Sin3_bdg
ocr
Motif
Other DBs
NCBI-GeneID:
102361449
NCBI-ProteinID:
XP_014347477
LinkDB
All DBs
Position
Un
AA seq
570 aa
AA seq
DB search
MSDWAYYRKGDDEDEQEEEAGEQGEGDVKYSGRDSLIFLVDASSAMFESSDEGELSPFDM
TIQRLRFHQRAKRVLELNKFRGDEGQRHFREKIGHSADFSLGEALWVCSNLFSDVKVKLS
HKRVMLFTNQDNPHVDDGGKARMARTKAADLREMGIFLDLMHLKKPGGFMISHFYRDIIT
VLEDEDLGVHFEESAALEDLLKKVRAKEMRKRAQARLNLKLGEGVAMCVGVYHLVRSATK
PYPVKLYRETNEMVKTKTRWFNTETGSLLLPSDTKRTQTYGNRQIVLEKEEVEELKRFDN
PGLVLIGFKPLSMLKRQHHIKPTQFLYPDETLVTGSTSLFNALLTKCLEKGVFAVCRYTA
RRNMPPRFVALVPQEEQLDEQKVQVVPSGFHLISLPYADDIRKMDYTEKIPANQDQVDKM
KQIVHKLRFKYRSDNFDNPVIQQHFRNLEALALDLLEPEKVEDLTMPKNEMIDSRLGSLT
EEFKDLVYPPSYSSEGKGQKRKTGEGMGGAEKRPKAEVSFVEADVQDYVRKGTLGKLTVP
MLKEISKQYGLRGSKKQELIDAITKHFSKP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattgggcgtactatcgaaaaggggatgatgaggatgagcaggaggaagaggca
ggagagcagggcgaaggtgacgttaaatacagtggtcgagacagtttgattttcttggta
gacgcctcaagtgccatgtttgaatcctctgatgagggagaactttctccgtttgatatg
acaattcagcggcttcgtttccaccaacgcgcaaagcgagtgctggagctcaacaagttc
cgaggcgatgaggggcagcgacacttcagggagaagattggccacagtgccgacttctcc
ctgggtgaggcgctctgggtctgctccaacctcttcagcgatgtgaaggtgaagctgagc
cacaagcgggtcatgctcttcaccaaccaggacaaccctcacgttgatgacggcgggaag
gccaggatggcgaggactaaggcggccgacctccgagagatgggtattttccttgacctc
atgcacttgaagaagcctggtgggttcatgatctcccacttttatcgggatatcattact
gtcttggaggacgaggatctgggtgttcattttgaggagtccgcagctttggaagacctc
ctgaagaaagtccgagcaaaggagatgcggaagcgggcacaggcgaggttgaacctgaag
ctgggagaaggcgtggctatgtgtgttggggtgtaccacctggtgcgaagtgccaccaag
ccctacccggtgaaactgtaccgggagaccaacgagatggtgaaaactaagacccgctgg
ttcaacactgaaacagggagcctgctgctgcccagtgacaccaagaggacccagacgtat
ggaaaccggcagattgtgctggagaaggaagaggtggaagagctgaagagatttgacaac
ccgggtttggttctgattggcttcaagccattgtcgatgctgaagaggcaacaccacatc
aagccaacgcagtttctctatccagacgagaccctggtgacgggcagtacatctctgttt
aatgccttgctgaccaagtgcctggagaagggtgtgtttgccgtgtgcaggtatacagca
cgcaggaacatgccgccacggttcgtggcgctggtaccgcaggaggagcagctagatgag
cagaaagtgcaggtggtaccatcaggatttcatttgatttccctgccatatgctgacgat
atccggaaaatggattacacagagaagatcccagccaatcaagaccaggtggataaaatg
aaacaaattgttcacaagctccggttcaaatacaggagtgacaactttgataaccccgtg
attcagcaacacttcagaaacttggaggctttggcattagatctgctggaaccagagaaa
gtggaggacctgaccatgccgaagaatgagatgatagacagcagactggggagcctgacg
gaggaatttaaggacctggtttatccaccgagctacagctcagaggggaaaggacagaaa
cggaaaacaggtgaggggatgggtggagcagaaaaaaggccaaaggcagaggtgtccttt
gtggaggcggacgtccaggactatgtgaggaagggcactcttggtaagctgacggtgccc
atgctgaaggagataagtaagcagtacgggctgcggggtagcaagaagcaagagctcatt
gacgccattaccaagcacttctcaaagccctga
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