Larimichthys crocea (large yellow croaker): 104919122
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Entry
104919122 CDS
T04659
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104919122 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104919122 (usp24)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104919122 (usp24)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104919122 (usp24)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104919122 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
UBA
DUF3517
Motif
Other DBs
NCBI-GeneID:
104919122
NCBI-ProteinID:
XP_019133223
LinkDB
All DBs
Position
XVII:11860116..11889792
Genome browser
AA seq
2623 aa
AA seq
DB search
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGLGSSGEGGENSGRTGTGGFDPPPAYHDVVDSERSNDENGNCSGGSMEFPTTNLYELES
RVFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFMDRCMPEAFKKLLTSSAV
HKWGTEIHEGIYNMLMLLVELVAERVKQDPVPVNLMGVLTMAFNPDNEYHFKNRMKACQR
NWAEVFGEEANMFAVSPSNTYQKEPHGWLVDLVNRFGELGGFTAIQSKLNTDEIEIASVS
ALVQPLGVGAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPDLLSAIKLLC
MRFQRELVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDKL
LDWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWRIQAGQSSTVIEN
IHTIIAAAAVKFSFDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVL
EVLWELAHLPTLPTSLVQQALEEHLGILSDAYAVKETVKRNYIIKCIEDIKKTQEDSKGS
DTQSSFLTGTWGKKKANSLAKASQQSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSII
QDLKKNFEIVKLITGSLVSCHRLAVTAGGNNGLSGSTLVDGRYTYQEYLDSHLRFMAFFL
QEASLYLVWNRAKELWECLVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKL
EPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEIA
NEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATKM
LTATAMPTVATSVQSPSRYRGGFGSTKLVIIERLLLLAERYVITIEDMYSVPRTILPHGA
SYNGHPVTLHITYESTKDTFTLETHSNETIGSIRWKISEHLSCPVDNVQIFANDSVLTMN
RDQKLLSQLGFSDEQSLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEKSLPG
VVMALVCNVFEMLYQLANLDESRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQK
TLFQGTGSRSPSMSSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDD
EMAKTSSKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQS
MPAALDDDVIRDGEALSSRPFRNAGRAGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIP
AARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRETHSSLLPQGVRTRVSS
TGSNCSSSSEGETTPTALHAGICVRQQSVSIKDAIIAREALSLLVTCLQLRCQQLCSFYN
LPSVNDFIIDILLGSPSGEIRRVACDQLYTLSQSDTSAFPDVQKPNLFLLSVILTAQLPL
WSPTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEVVKVSAATMLEDEISWLDNFEP
SWSSEMETSEADNILLAGHLRLIKTLLSLCGNEKEQLGASLIQQLLDDFLFRASRIIINS
SNPTPSPAPSHDFHPKCSTASSRLAAYEVLVMLADSSLSNLRLITKELMSMHHQSDPSLC
KEFDYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIEDDTDQPEESV
FYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKK
MGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVL
EGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESARSIKYDEQIRFPWVLN
MEPYTVSGMARQDCSTEGGEGRGDGTSGGSPRKKVTISENYELVGVVVHSGQAHAGHYYS
FIKDRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWN
AYMLFYQKISDQNSPVLPKKSRVSIMRQEAEDLTLSAPSSPDVSPQSSPRPPRANNDRLT
LLTRLVRKGEKKGLFVEKMPASIYQMVRDENLKFMRNRDVYNSDYFNFALSLASVNATKL
KHPDYQPMAKESLQLAVHFLLHTYLHTKKKLRVDTEEWMATVEVLLSKSCEACQWMVQYL
VGPEGREITRVCLLECSVREVRVVVASILEKTLESALHFGDPGLDNLTDALLSLLDKDVP
ENVKNCAQYFSLFSNFAQRGCGPCQLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQARE
FLHLHSTLALITLHSDLSPQRTQAPGGFKLRLSGVTSSNPLLPLHADILASLFTPEGQPY
LLEVMFAMRELSGPLSLLIEMVTYSSYCNEPFSLGVLQLLKTQLETAPPHELKNVFQMLQ
ELLVMEDPLQAQRLKYAFESEKGLLALMHQSNNVDSRRCYQCVKFLVTLAQKCAPAKDYF
KDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKTFQRTISAQDTLAYATALLNEKE
QSGSSNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7872 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacataaccacgctcctctgcatggggttcccggaccca
gacgtgatacggaaagcgctccggctcgcgaaaaacgacatcaacgaggcagtggcgctc
ctgaccaacgaaagccccggactcgggtatggatacgagccgatggagagcgggcctgcc
cccggcttgggctcgagtggtgaaggtggggagaacagcggtcggaccgggactggaggg
ttcgacccaccgcctgcataccacgatgtggtggacagcgagagaagcaatgatgagaac
ggaaactgctccgggggcagcatggagtttcccaccaccaacttgtacgagctggagagt
cgagtcttcaccgaccactggtccataccgtacaagagagaggagtctttgggcaagtgt
ctcatcgcgtccacctgcctcgcccggcacggtctcgctgacgctgacgagaactgcaag
cgcttcatggatcggtgcatgccggaggcctttaaaaagttgctgaccagcagtgctgta
cacaaatggggcacggagattcacgagggaatctacaacatgctcatgctgctggtggag
ctggttgcagagagggtgaagcaggaccccgtacctgtgaacctgatgggagtcctgact
atggccttcaaccctgacaacgagtaccattttaagaaccgcatgaaggcctgtcagagg
aactgggctgaagtttttggagaagaggccaacatgtttgctgtctcccctagcaacacg
tatcagaaagagcctcacggttggctggtcgatctggtgaatcgatttggagagttggga
gggttcactgccatccagtcgaagctcaacacagacgaaattgagattgctagtgtgtca
gctctggtccagcctcttggagtcggtgcagaatacctaaactccagcctcgtccagccc
atgctcgatccagtcatccataagatgatcacgtatgtgcagaacctggaggaaaaggac
cttaaagacaagcgtctggtgagcatccccgacctgctgtcggccatcaagctgctgtgc
atgaggttccagagggagctggttactgtggtggatgacctgcggctggacacactgctg
cgcatgctcaaaaccccccacttctctaccaagatgaactccctcaaagaggtgacaaag
ttaatagaggagagtacagtgtctaagacggtgaagaatgccatcgacactgataaactt
ttggactggctggtagagaactcagtcttatcaatagcactggagggaaacattgaccag
gctcagtactgtgagagaatcaaaggaatcattgagttactggggagtaaactgtcgctg
gacgaactctccaagatctggaggatacaggcgggccagtcttcaactgtgatagaaaac
attcatacaatcatcgccgctgctgctgtgaagttcagctttgatcaactcacccacctc
ttcgtcctcatacagaagagctgggaggttgagagcgaccgcgtcaggcagaagctgctc
agtctgatcgggaggatcggcagagaagctcgctcggaaactacaactggaaaggtgctg
gaggtgctgtgggagttggctcacctccccaccctgccaaccagtctagttcagcaggcg
ttggaggaacacctggggattctgagcgacgcctacgctgtcaaggagaccgtgaaacgc
aactacatcattaaatgtatcgaggacattaagaagactcaggaggacagtaaaggcagc
gacactcaaagctcatttcttacgggcacttggggcaagaagaaagctaactctttggcc
aaagcttctcagcagagcagtcctcaggcagtgtgggtcgttcctgctctccgtcagctg
catgagatcacccgttctttcatcaagcagacctatcagaaacaagacaagagcatcatc
caggacttgaagaagaactttgagatcgtcaagctgatcacgggatccctcgtaagctgc
catcgactggctgtgaccgccgggggaaacaacggcctctcagggtcaactctggtagac
ggacgatacacctaccaggagtatctggacagccacctgcgcttcatggccttcttcctc
caggaggccagcctctacctggtctggaacagggccaaagagctctgggagtgcctggtg
tcggggccagatgtctgtgaacttgaccgtgagatgtgttttgagtggttcaccaaagga
caacacgacctcgagagtgacgttcagcagcagctcttcaaggagaagatcctcaaactg
gagccttatgagatcaccatgaacggtttcaatctgttcaagacgttctttgagaacgtt
aatctgtgtgaccatcgcctcaaacgccagggaactcaactgtgtgtggaacgccttgac
ctggcagggatggattttatctggcgcatcgccatggaaacccccgatgaagagatcgcc
aatgaagcaatccagctcattatcacatatagctacaccaacctcaatcccaagatgaag
aaggattccgtgtctttgcacaagaagtttattgctgattgttataagcgactagaggca
gccagctcggccctgggcgggcctactttgacacatgctgttactagggcaaccaagatg
ctgacggccaccgccatgccgactgtggccacatctgtacaatcaccatccaggtacaga
ggggggtttggatcaactaagctggttataatcgaaagactgctgctactggctgaacgc
tacgtcatcactatagaggacatgtactcagttcctcgcactattctacctcacggggcc
tcgtacaatggacaccctgtcactcttcacatcacctacgagtcaaccaaagacactttc
accttagagacccacagtaatgagacaataggaagtatccggtggaagatttccgagcac
ttgagctgtccggtggataatgtccagatctttgccaatgacagtgtgttgaccatgaat
cgggatcagaagctgctgtcccagcttggcttcagcgatgagcagagtctaactgtgaag
agctcgggcaccggcactccctccggcagctctgagtcctcggcctccgcctccagcagt
tccagctcggctgtcttcaactcagcctacgccttggagcaggagaagtcgctccccggt
gtggtgatggctttggtgtgtaatgtgtttgagatgctttaccagctggctaacctggat
gaatccaggatcacccttcgtgtgaggaagctgctgctgctgattccaacagatccagag
gtgcaggatgctctcgacaactttgttcccaaagaatccagcgtctggagccaccagaaa
acactgttccagggtacaggctctcgttctccgtctatgtcctccaagcagcagcaccaa
cccagtgctgcatccattttagagtccctcttcaggtcctcggccccgggcatgtccacc
ttcagagtgctgtacaacctggaggtgttgagttcaaagctcatgcccacatcggatgat
gagatggccaaaaccagcagcaagtccttctgtgagaacttccttaaagcaggaggcctc
agtctggtggtgaatgttatgcagagagattcaatcccatcagaggtggactatgagacc
aggcagggagtctactccatctgtctccagctggccaggtttcttctggttggtcagagc
atgcctgctgcgctggacgacgatgtcatcagggacggcgaggcgctgtcgtctcgtcca
tttcgtaacgcgggacgggccgggagacagttgtctctctgcggaacgccagagaagtcc
tcctacagacagatgtctctgtccgagcgctcctccattagagtcgaggagatcataccc
gccgctcgtgtagctattcagaccatggaggttggcgatttcacctcaactgtggcctgt
ttcatgcgcctgacctgggcagcggcagcgggccggttagatctggtcggcagccctcag
ccaatcagagagacccacagctctcttctgccgcagggcgtgcgcaccagagtcagcagt
acagggagtaactgcagctccagcagtgagggcgagaccacgccaacagctttgcacgcg
gggatatgtgtcagacagcaaagtgtctcgatcaaagatgccatcatcgctcgcgaggcc
ctgtcactgctcgttacatgtctgcagttacgctgccagcagctatgttctttttacaat
cttccctccgtcaatgactttatcattgatattcttctgggatctcccagtggagagatc
cgtcgcgtcgcttgcgatcagctctacaccctgagccagtctgacacttcagccttcccc
gatgtccagaaacccaacctgttcctcctctcggtcatcctcactgctcagctgccacta
tggagtcccacgtctgtgatgaggggggtcaatcagaggttgctgtcccaatgcactgag
tactttgacctaagatgtcagcttctggatgacctaaccacttcagagatggaggtggtg
aaagtgagtgcagccaccatgctggaggacgagatctcctggctcgacaactttgagccc
agttggagctctgagatggagaccagtgaggcggacaacatcctcctggcgggacacctc
cgcctcatcaagaccttgctttcactgtgtggcaatgagaaggaacagctcggggcgtct
ctgatccagcagctcttggacgacttcctgtttcgagcctcgcgcatcatcatcaacagt
tcaaatcccacgccctccccggcccccagccatgacttccaccccaagtgcagcacagcc
agcagcaggctggcagcttacgaggtgttggtgatgctggcagacagctctctgtcaaac
ctccggctcatcaccaaagagctgatgtcaatgcaccaccagtctgatccttccctctgc
aaggagtttgactatctaccccctgtggagagccggtcggtctcaggtttcgtcgggcta
aagaacggcggagccacatgttacatgaacgctgtgtttcagcagctctacatgcaaccc
ggcctgccagaggctttcctgtccattgaggatgacaccgatcagccagaagagagcgtc
ttctaccaggtccagtctctgtttggacacctgatggagagcaaactgcagtactacgtc
cccgagaacttctggaagatctttaagatgtggaacaaggagctgtatgtaagagaacag
caggatgcttatgagttcttcaccagcctggtggaccagcttgacgaacatctaaagaaa
atgggtcgagaacagatcttcaaaaacacgtttcagggaatcttctccgatcagaagatt
tgtaaagactgtcctcaccggtacgagcgtgaagaaacgttcatggctttgaacctcgga
gtgacgtcttgtcaaagtttagagatctctttggaccagtttgtccgaggagaggtgcta
gagggcagtaacgcctactactgtgagaaatgcaaggagaagagaaccacggtgaagagg
acgtgtatcaaatccctgcccagcgtcctttgcattcacctcatgcgctttggcttcgac
tgggaaagcgcgcgctccatcaaatacgacgaacagattcggttcccctgggtgctgaac
atggagccgtacaccgtctctggaatggctcgtcaagattgcagcacggagggcggcgag
gggcgaggcgacgggacctcaggagggtcgccgaggaagaaagtcacgatctctgagaac
tatgaactcgtcggagttgttgttcacagcggtcaggcacatgccggacactattactcc
ttcattaaggatagacgtggcagcgcccgcggacgctggtacaagttcaacgacaacgtg
gtggaggagttcgacatgaacgacgaaactctggagtacgagtgcttcggtggagagtac
cgtcccaaagtttacgaccaatccaacccgtaccctgacgtgcggaggagatactggaac
gcctacatgttgttctatcagaagatcagtgaccagaactcacccgtcctgcccaagaaa
agcagagtcagcatcatgaggcaggaggctgaagaccttacactgtccgccccgtcctct
cctgacgtttccccgcagtcctctcctcgccccccgagggccaacaacgatcgcctcacc
ctcctcacccgcctggttcggaagggagagaagaagggcctgtttgtggagaagatgccc
gccagcatctatcagatggtcagagacgagaatctcaagttcatgaggaacagagacgtc
tacaacagcgactacttcaacttcgccctctccctggcctccgtcaatgcaacaaagctg
aagcatccagactaccaacccatggccaaagagagtcttcagctggctgttcactttctc
cttcacacctacctgcacaccaaaaagaagctccgggtggacacagaggagtggatggcc
acggtggaggtgttgctttctaagagctgtgaagcctgtcagtggatggtgcagtacttg
gttggaccggagggacgagagatcaccagggtttgtctgttggagtgcagtgtaagagag
gtgagggtggtggtcgcatccatccttgaaaagactctagagagcgcgctccactttgga
gacccgggattggacaacctgaccgacgccctgctctccttactggacaaagacgtcccc
gagaatgtgaaaaactgtgcgcagtacttcagcctcttcagcaacttcgctcagaggggt
tgcggtccttgccagttgttgttgaaacactcagcgtatcgccggatgcttatcttcctg
ttgggacccaataggcaaaacaaccagaaccggcggtggagtccggctcaggctcgagag
tttcttcacctccacagcactctggctctcatcactctacactctgacctcagcccacag
cggacgcaggctccgggaggatttaaactgcgtctgagcggcgtcacgtcctccaacccg
ctcctccccctccacgcagacatcctggcctcgctcttcactccggagggacagccttac
cttctggaggtgatgtttgccatgcgtgagttgtcaggtcctctgtctctgctgatagag
atggtgacctacagttcgtactgtaacgagcctttctccctgggtgtgctgcagctgctc
aagactcagctggagacagctccacctcatgaactgaagaacgttttccagatgctgcag
gagctgctcgtaatggaagaccctctgcaggcccagagactcaagtatgccttcgagtca
gagaaaggccttttagctttgatgcaccagagcaacaacgtggacagcagacgctgctat
cagtgtgtgaagttcctggtcacattggcccagaagtgtgctccagccaaggattacttc
aaggacttgtctggtcactggagctgggcggtgcagtggctgcaaaagaagatgacagaa
cactactggactccacagagtaacgtctccaatgaaacatccaccaataaaaccttccag
cgtactatctctgcacaggacaccttggcctacgccacggcgctgttaaacgagaaggag
cagtccggcagcagtaacggttctgacggcagcccggccaatgaaaacgccgaccgcagc
ctccgacaggggtcggagtctcccatgatgctcggcgattcgaagagcgatctagaggac
gttgacccctag
DBGET
integrated database retrieval system
