Larimichthys crocea (large yellow croaker): 104920314
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Entry
104920314 CDS
T04659
Name
(RefSeq) transcription factor COE2 isoform X1
KO
K09103
early B-cell factor
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104920314
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104920314
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
104920314
NCBI-ProteinID:
XP_010730848
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Position
III:complement(29032085..29060794)
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AA seq
591 aa
AA seq
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MFGIQEHLIREVSGLKERSLGEEMDPVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRHGQPVEVERTAFVDFVEHDKEQTGEKTNNGTHYKLQLLYSNGV
RTEQDLYARLIDSVTKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLEPGESVENSMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPEKLAKEILLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHSQ
LQALPSSPAHGSVMGLGSYPSQLGVSIGEPGQSSQGYIRNSSSLSPRGYPSASTPQQSSY
GGSGGMTGGYGTVPMTSLGVPGSPGFSSASPTGSPYIMPSSPTIPGSSSSSSSLLPFSSF
PSAAKQKSAFAPVLRPQGSPSPACPASGGNSFRGSHPTHYLTPLSELTNAV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggatccaggagcatctgatacgagaagtgagcggattaaaagagagaagtctt
ggagaggagatggatccagtccggtcgtgggtgcgtaatgtcggggttgtggatgcgaac
gtagcagctcaaagtggagtagctttgtcaagagctcactttgagaagcagccgccctca
aatctccgcaagtccaacttcttccactttgtcctggcgctctatgacagacacggccaa
cctgtggaggtggagaggaccgcgtttgtggactttgttgagcatgacaaggagcagacg
ggagaaaagaccaacaacggcacgcactacaagctgcagctcctctacagcaatggagtt
cgtacagagcaggatctttacgcacgacttatcgattctgtcaccaaacagcccatatca
tatgagggacaaaacaagaatccagaaatgtgcagagttctgctcacacacgaggttatg
tgcagccgctgttgtgagaagaaaagttgtggcaaccgaaacgagacgccctctgaccca
gtcatcattgacaggtttttcttgaagtttttcctgaaatgtaaccagaattgtctgaag
actgcaggaaacccaagggatatgaggagatttcaggtggtcttgtccagcactgtgagc
gtcgacgggcatgtcctagcagtgtctgacaacatgttcgtccacaacaattcgaaacat
ggccggagagctcgcagacttgagccaggcgagtctgtcgagaatagtatggaatatgcc
accccgtgtatcaaagccatcagtcccagtgagggctggaccaccggcggggccatggtc
attgtcatcggggagaacttctttgacgggctgcaggtggtgtttggcagcatgctggtg
tggagtgagctgatcacaccgcacgctatccgtgtccagacaccccctagacacatcccc
ggggttgtggaggtcacactgtcttataagtctaaacaattctgcaagggagcccctgga
cgcttcatctacacagccctaaatgaaccaactatagactatggtttccagcgcctccaa
aaggtcattcctcgacatcctggtgacccagagaaactagccaaggaaatcctcctgaag
agagcagcagatcttgttgaggctctgtatggaaatccacacagtaaccaggacatgctg
ctgaaacgtgcggccgacatcgcagaggcgctctacagtgttccccgtcctcacagtcag
ctgcaggcgttgcccagctcaccagcccacggcagtgtcatgggcttgggctcttatcct
tctcagttaggtgtcagcatcggggagcctggacagagcagccaaggttacattcgaaat
tccagcagtctgtctccaaggggttacccatcagcctccactcctcagcagtcaagctac
gggggcagcggagggatgactgggggctatgggactgttcccatgaccagtctaggagta
cctggctctcctggcttcagcagtgcctcccccaccggctctccctacataatgccctcc
agccccactataccaggaagctccagctcttcatcgtctctcttgcctttctcctccttc
ccgtctgctgctaaacagaagagtgcttttgctcccgtcctcaggccccagggctctccc
tcccctgcctgccctgcctcaggggggaacagcttcagaggtagccatccaactcactat
ctgacccccctgtctgaacttacgaatgcagtctaa
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