Larimichthys crocea (large yellow croaker): 104923371
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Entry
104923371 CDS
T04659
Name
(RefSeq) xylosyltransferase 1-like isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lco00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lco01100
Metabolic pathways
Module
lco_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104923371
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
104923371
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lco01003
]
104923371
Enzymes [BR:
lco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
104923371
Glycosyltransferases [BR:
lco01003
]
O-Glycan biosynthesis
Glycosaminoglycan
104923371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
TX13_rpt
Motif
Other DBs
NCBI-GeneID:
104923371
NCBI-ProteinID:
XP_027140732
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Position
XII:31268410..31296744
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AA seq
936 aa
AA seq
DB search
MNGNPCARRLARRSKSALLVAALAVLLVQTLIVWNFSSLDSAGGDGGARSREKREEQAGG
LNKADREPPRRGLQKKGDPPPPLLGKAAARHKLQADVYHSHRPKEKLRLDSNNNENSVPK
DFDTIDSNSNLGARSQRQRVPVANAKRKMDKAQAQSMLGKSANEVLKHPPVQPREMGLNH
NRTHVHKPRPQVPTILAPVQGSNQDPPFYQTRKSATQLPPGLEPRKEQLQCEISGKEAIS
ALSRSKSRECRQQIVEVYCKHKERALMPEKVPRYCPREGKANVNVQWDEDPSDAAQLVPV
RIAFVLVVHGRASRQFQRLFKAIYHTSHYYYIHVDQRSNYLHKEVLSLASQYSNVRVTPW
RMSTIWGGASLLTMYLRSMEDLLKMSDWSWDFFINLSAADYPIRTNEQLVAFLSKYRNMN
FIKSHGRDNARFIRKQGLDRLFYECDTHMWRLGDRKIPEGIAVDGGSDWFLVNRPFVDYV
VNSQDELVSSMKRFYAYTLLPAESFFHTVLENSAHCETMVDNNLRLTNWNRKLGCKCQYK
HIVDWCGCSPNDFKPSDLPRFQQASRPTFFARKFEASVSQEIINQLDAYLFGSYAPGTSG
LQAYWENIYEQETDGPTSLSDSLLSHYHAFAHMGLSRAASSLQGHPNDNSCRYMAMSHPV
SVHLYFLSDQFQGYLVRHVATNRASTQLETLETWVTRKDHFTPASPPHPNNRLQHIQVGT
DWDPKERLFRNWGGLVGPEDEPVAVQRWSRGQSNLTATVVWIDPTNVIAATYDILVDASA
EVTHYRPPLSLPLRPGIWTLRVLHHWNPLGQTSFIVAPLDFHRLQPLQQEDALRLHGGPP
RNSYMEQSFHGLNPVLRLPVSLGAVEEAEANAGLTGAPLRRWLDRLLEGHWSAADICSMG
PSACPVMQRCRLTVWSSASPDPKSELNPPRENGRIR
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtaacccgtgcgcccgcaggctggcccggcgctccaagtccgccctgctggtc
gctgctctggccgtcctgctggtccagactctcatcgtgtggaacttcagcagcctggac
tctgccggcggggacggaggcgccaggagccgggagaagagagaggagcaagccgggggg
ctcaacaaagccgacagggagccaccgcggagggggctgcagaagaagggcgacccgccg
ccgccgctgctcgggaaggcggccgctcggcacaagctgcaggcggacgtgtaccattcc
caccggcctaaagagaaacttcgcctggacagcaacaataatgagaactcggtccctaaa
gacttcgacaccatcgacagcaacagtaacctgggagctcgatctcaacgccaacgagtg
ccagtggcaaacgccaaacgcaagatggataaggctcaagcacaaagcatgctgggtaaa
tctgctaatgaggtcctcaagcaccctcctgtccaacccagagagatgggcctcaatcac
aaccgcacccatgtccataaacctcgcccccaggtgccgaccatcttggcaccggtccag
gggtccaatcaggatccaccgttctaccagacgaggaagtcggccactcagctgccaccc
ggtttggagccgaggaaggagcagctgcagtgcgagatcagcgggaaagaagcgatttca
gctctgtccagatccaagagccgcgagtgtcggcagcagatagtggaggtgtactgcaag
cacaaagagagagcactgatgcccgagaaggtgccgcgctactgccccagagaaggtaag
gctaatgtgaatgtacagtgggacgaggacccctcagatgctgcccagctcgtgcctgta
cggatcgccttcgtcctggttgtccacggtcgagcctcgcgtcagttccagcgtctcttc
aaagccatctaccacacctcgcactactactacatccacgtggaccagaggtccaactac
ctccacaaagaagtcctgtctcttgccagtcagtactccaacgttcgggtgactccctgg
cggatgtccaccatctggggtggagccagcctgttgactatgtacctacgcagcatggag
gaccttctcaaaatgtccgattggtcctgggatttcttcatcaacctcagtgctgcagat
taccccatcaggaccaatgaacagctggtggctttcctatccaagtaccgcaacatgaac
ttcatcaagtctcacggcagggacaacgcacgcttcatccgtaagcagggtttggaccgt
ctcttctacgagtgtgacacccacatgtggcgtctcggggaccgcaagatcccagagggc
attgcggtggacggaggctctgattggttccttgtcaaccggccttttgtggactatgtg
gtgaactcccaagacgagctggtcagcagcatgaagcgcttctacgcctacacactgctg
cctgctgagtcatttttccacactgtgctggagaacagcgcccactgtgagaccatggtg
gacaacaacctgaggctcaccaactggaaccgcaaactgggctgtaaatgccagtacaag
catatagtggactggtgtggctgctcacccaacgacttcaagccctcggacctgccgcga
ttccagcaagcgtccagaccgaccttctttgctagaaagtttgaggccagtgtcagtcag
gagatcatcaaccagctggacgcctacctgttcgggtcgtacgccccgggtacttcgggc
ctccaggcctactgggaaaacatctacgagcaggagacggacggccccaccagcctatca
gactccttgctcagccactaccacgccttcgctcacatgggactgtcccgcgccgccagc
tcgctacagggccatcccaatgacaacagctgcaggtacatggctatgagccacccagtg
tcggtccacctctacttcctgtcagaccaatttcagggctacctggtgcgtcatgtggcc
actaaccgagcttccacccagctggagaccctggagacctgggtgacacgcaaagaccac
ttcaccccagccagccctccacaccccaacaacaggctgcagcatatccaggttgggacg
gactgggatccgaaggagcgtctcttcagaaattgggggggtctcgtgggacccgaggac
gaaccggttgctgtgcagcgttggagccgaggccagagcaacctgacggccaccgtggtg
tggatcgaccccacaaacgtcatcgccgccacttacgacatcctggtggacgcttctgct
gaggtcacccactaccggccgccgctctccctgcctctgaggcccggcatctggaccctg
agggtgctgcatcactggaacccactgggtcagaccagcttcatcgtggccccactggat
ttccacagactacagcccttacagcaagaggatgccctccgtttgcacggcggcccaccc
agaaactcctacatggagcagagtttccacggcctgaacccggtgctgcggctgccagtg
agcctgggtgctgtggaggaggccgaggccaacgctggcctgacaggggcgccgctgcgt
cgctggctggaccgactgctggagggccactggtcagcggcggacatttgctcgatggga
cccagcgcctgccccgtcatgcagcgctgtcgtctcactgtgtggagctctgccagcccc
gacccaaagtctgaactgaacccgcccagagagaacggacggatcaggtag
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