KEGG   Larimichthys crocea (large yellow croaker): 104926109Help
Entry
104926109         CDS       T04659                                 

Gene name
hdac4
Definition
(RefSeq) histone deacetylase 4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:lco00001]
 Environmental Information Processing
  Signal transduction
   04371 Apelin signaling pathway
    104926109 (hdac4)
Enzymes [BR:lco01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104926109 (hdac4)
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     104926109 (hdac4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 104926109
NCBI-ProteinID: XP_010738187
LinkDB All DBs
Position
Un
AA seq 1117 aa AA seqDB search
MSSHSRSGGLTNNEQPLELLKPATRNHFVDVSSAALPMQVPPTATAILPMDLRVVDHPHH
HHHHQQPSFGLVPQPHPTPPTSTACPASSEPGRGPVINHQEQQLQQELVALKHKQQLQRQ
LLIAEFQRQHEQLSRQHEVQLQEHIKHQQDLLALKHQQELLEHQRKMEQQRHEQELEKQQ
REYKLQQLKNKDRGQESAVASTEVKMRLQEFVLNKKKALAQRNLNHCLPSDPRFWYGKTQ
HSSLDQSSPPQTALSAYNHPMLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPL
LRRKDGPITTAKKRSLDVAESACNSAPGSGPSSPNNSSSNIPSENGVTISSSPGEASLLQ
RLAAREGSVSQLSLYTSPSLPNITLGLPATGPASTVVSGHQDGESRLALPALQQGIPLTP
PFLPTAHLPSYLASSALDREGAGGGTAGHNPLLQHMVLLEQGHSPIVGLGGLPLPSPAVS
KLARGHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQQFQQQQQQHIINKI
MSKPSDQVSAVSSSASGPARQHQSHPEETEEELREHQELSTSSSSSSSTSIQETGPLRGL
VIKQEPPDPQEQDEREQRDRQAEKDFLFRQQQALLLEQQRIHQLRNYQASMEAAGLSVSF
AGHRPLSRAQSSPASASFPMVVQEPPAKPRFTTGLVYDSLMQKHQCMCGNTTSHPEHAGR
IQSIWSRLQETGLRAHCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCSVSPMFV
RLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASAELKNGFAVVRPPGHHAEES
TPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYTDPSVLYLSLHRYDD
GNFFPGSGAPDEVGSGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVV
LVSSGFDAVDGHASPLGGYKLTAKCFGYLTRQLMGLAGGRLVLALEGGHDLTAICDASEA
CVSALLGNELDPIPDEVLQQRPNANAVHSMEKVLEAHSKYWRSLQRSASTLGCSLSEALQ
RDAEEAETVSAMASLSVANKHIGKRAEEEPMEEEAPM
NT seq 3354 nt NT seq  +upstreamnt  +downstreamnt
atgagctctcacagtcgatcaggtggtttgaccaacaacgagcagcctttggaacttctt
aaaccagccacacgcaaccattttgtggacgtgagctcggcagcactgcccatgcaggtg
ccccccaccgccacagccattcttcccatggacctgcgtgtagtagaccatccccaccac
caccaccaccaccagcagccctccttcggcctggttcctcaaccccatcccacgccgccc
acctccacagcttgtcccgcatcctcagagccaggccgtggtccagtcattaaccaccag
gagcagcagctgcagcaggagctggtagctctcaaacacaagcagcaactccagagacag
ctactgattgctgagttccagaggcagcatgaacagctgtcgcgacaacatgaagtccag
ctgcaggagcatatcaagcatcaacaggatttactggcgctcaagcaccaacaggagctg
ctggagcaccagaggaagatggagcagcagcgtcacgagcaggagctggagaaacagcaa
cgtgaatacaaactccaacagcttaaaaacaaggacaggggacaggagagtgcagtcgct
agtacagaggttaagatgcgacttcaggagtttgtcctgaacaagaagaaagccctggct
cagcgaaacctaaaccactgtctgcccagcgacccacgcttttggtatggaaaaacacag
cacagctctttggaccagagctctcctcctcaaacagcattgtcagcgtacaaccaccca
atgctgggcacatatgactcaaaagatgacttccctctccgcaaaacagcctctgagccc
aatctgaagcttcgttcccggctaaagcagaaagtgacagagcgtcgcagcagccctctg
ctccgaaggaaagatggtcccatcactactgccaagaagcgttccttagacgtggctgag
tctgcatgcaacagtgcaccaggctcaggtcccagctcccccaacaacagctccagtaac
atccccagtgagaatggggtcaccatctccagcagtccaggagaggcctctttgcttcag
aggttggctgcaagagaaggttcagttagccaactctctctctacacctctccttctctg
cccaacatcaccctgggactaccagccacaggtcctgctagcaccgtggtatcaggacac
caagatggtgagagtcgtctggcattgcctgcgttacagcagggcattcctctgacccct
ccattcctgcccactgcccacctgccctcctacttggcatcttcagctctggacagggag
ggggctggagggggtacggctggtcacaacccccttctccaacacatggtactgctggaa
cagggccacagtccaattgttggtctgggtggcctcccactgccgtcacctgctgtctcc
aaacttgcacggggccaccgtcccctgggaagaacccagtcagcacctttgccccagcag
caatgtggccaggcccaggctctgcagcagctagtggtccaacagcagcaccagcagttc
ctggagaaacacaaacaacagttccagcagcaacagcagcagcacatcatcaacaagatc
atgtccaagcccagtgatcaggtctcggctgtaagctccagcgcctcagggccggcgaga
cagcaccagagtcacccagaggaaacggaagaggaacttagggagcaccaggagctctcc
acctcatcctcatcctcatcctctacatctatacaggagacagggcctctgcgagggctg
gtcatcaagcaggagcccccagaccctcaagagcaggatgagagggagcagagggacaga
caggccgagaaggacttcctgttccgacagcagcaggctctgctgttagagcagcagcga
atccaccagttgagaaactaccaagcctccatggaagccgccgggttatcagtcagcttt
gccggacaccgccccctctccagggctcagtcttctccagcgtccgcctccttccccatg
gtagtacaggagccacctgccaagcctcgatttactacaggtctggtttatgactctttg
atgcagaagcaccagtgtatgtgtgggaacaccaccagtcatccagagcacgctggccgc
atccagagtatctggtcccgactgcaggaaacaggcctcagggcgcactgcgagtgtatc
cgtggtaggaaggcctcactcgaggagttgcagacagtccactctgaagcccacgtcctg
ctgtacgggaccaacccacttcggcagaaactagattgttcagtgagtcccatgtttgtg
aggttaccatgtggaggcataggggtggacagtgacactatttggaatgaggtccactcg
tccagcgctgctcgtctggccgtcggttcggtggtggagctcgtcttcaaagttgcatcg
gcggaactgaagaatggctttgctgtagttcgaccacctggacaccacgctgaggagagc
acgcctatgggcttctgttatttcaactcagttgcaatagcagccaagcttctgcaacag
aggctcaatgtcagtaaaatcctcattgtggactgggatgttcaccatggtaatggcacc
cagcaggccttctacacagaccccagtgttctctacctgtcactgcatcgctatgatgat
gggaacttcttccctggcagtggagcacctgatgaggtgggcagcggaccaggtgtaggc
ttcaatgtgaacatggccttcactggaggactggaacctcctatgggtgatgcagagtac
ctggctgcatttaggacggtggttatgcctattgcaaatgagtttgccccagacgtggtt
ctcgtatcttcaggctttgatgcggtagacggacatgcctctcccctgggaggatacaaa
ctgacagccaaatgctttggctacctgaccaggcagctgatgggtctggcaggcggtagg
ttggtgcttgccctggaggggggtcatgacctcacagccatatgtgatgcctccgaagcc
tgcgtctctgctctgcttggcaatgagttggaccccattcctgacgaggtgctacagcaa
agaccgaatgccaatgctgttcactctatggaaaaagttcttgaagctcacagtaaatac
tggcgctcactgcaacgctctgcctccacgctcggttgctcgttgagtgaagctcttcaa
cgcgatgcagaagaagctgagactgtctccgctatggcttcgttgtctgtcgccaacaag
cacattggaaagagggctgaagaggaaccaatggaagaggaagctcctatgtaa

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