Larimichthys crocea (large yellow croaker): 104926953
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Entry
104926953 CDS
T04659
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104926953 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104926953 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104926953 (snw1)
Spliceosome [BR:
lco03041
]
Complex B
Other components
Prp19-related factors
104926953 (snw1)
Complex C
104926953 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
104926953
NCBI-ProteinID:
XP_019125435
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All DBs
Position
XI:complement(16388409..16396870)
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AA seq
537 aa
AA seq
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MSLTSFLPAPTQLSQDQLEAEERLRAQKSYSTALVSSRREPPPYGHRKGWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQGQNKDKVVFSKYTDLL
PKEVLNQDTPELQKPDEEAVKELTEKTRAALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKGGGEDGEARERDEIRH
DRRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGVPNPRSGNEAQYDQRLFNQSRG
LDSGLNGGEDDVYNVYDQPFRGGRDMASNIYRPSRNIDKDAYTDDFDTLMQNNRFVPDKE
FSGADHGQRREGPVQFEEDPFGLDKFLQQAKHHGGSKRPSTSSRSKDDYHDKKRRKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgagctttttaccggcgccgacccagctgtctcaggaccagctggaggca
gaggagaggctccgggcccagaagtcctactccaccgccctggtgtcgtcccgcagagag
ccgcctccatacggacacagaaaaggctgggtgcctcgctcccttgaggactttggagat
ggaggagctttcccagagatccacgtggcccagtttcctctggagatggggaggaaaaag
aagacatccaacgctctggcggtgcaggtggatgcagaaggaaagatcaaatatgacgcc
atcgctagacaaggacagaacaaggataaggtggtgttcagtaagtacacagatcttctt
ccgaaggaagttctgaatcaagacactccagaactacagaagcccgacgaggaggctgta
aaagagctgacggagaagacccgggccgccctggacaagcaggtgtctcaaaagatcgct
gctgccatgcctgtaagagctgcagacaaacaagctcctgcgcagtacatcagatacacc
ccgtcccagcagggggtggcttttaactcgggggccaaacagagggtgatccgcatggtg
gaaatgcagaaagatccgatggaacctccacgtttcaagatcaacaagaagattcctcga
ggacctccttctccccctgccccggtcatgcattccccaagtagaaagatgacagtcaag
gagcagcaggagtggaagatccctccatgcatctccaactggaaaaacgcaaagggttac
accattcctcttgacaaacgtctggctgctgatggtaggggcctgcaaacagttcacatc
aacgaaaactttgccaagctggccgaggcgctctacattgctgacagaaaggccagagag
gcggtggagatgagagctcaggtagagaagaagatggcccagaaggagaaggaaaagaag
gaggagaaactgagggaactggcccaaatggccagagaccgcagggcagggatcaaaagt
cacggggacaaaggtggtggcgaggacggcgaggccagagagcgtgacgagatccgccat
gacagaaggaaagagagacagcacgacaggaacatttccagagctgctcctgataagagg
tcgaagctgcagagagaccaggacagggacatcagtgagctcatcgctctgggtgtgccc
aaccctcgatccggcaatgaggcccagtacgaccagagactcttcaatcagagcaggggc
ttggatagtggtttgaacggcggtgaggacgacgtatacaacgtgtacgaccagccgttc
cgtggcggcagagacatggcttcgaacatctaccggcccagcaggaatatagacaaggac
gcctacacagatgactttgacacactcatgcaaaacaacaggtttgttccagacaaagag
ttctcaggtgccgaccacggtcagaggcgggaagggccagtccagtttgaagaggatccc
ttcggtctggacaagttcttgcagcaggccaagcaccacggcggctccaagaggccatcc
accagcagccgatcaaaggatgactaccacgacaagaaacgcaggaaggagtga
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