Larimichthys crocea (large yellow croaker): 104928041
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Entry
104928041 CDS
T04659
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
lco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104928041
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104928041
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104928041
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104928041
03036 Chromosome and associated proteins [BR:
lco03036
]
104928041
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104928041
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104928041
SWI/SNF complex
104928041
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104928041
PBAF complex
104928041
SWI/SNF complex
104928041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
104928041
NCBI-ProteinID:
XP_010740554
UniProt:
A0A6G0HZT6
LinkDB
All DBs
Position
I:3256691..3264021
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggctctgagtaagacgtttggccagaagccagtcaagttccagctggagcag
gatggagacttctacatggtgggctcggaggttggaaactatctgcgtatgttcagaggc
tctctgtataaaagatatccatctttatggaggaggctggcctcggtggaggagaggaag
aaaatagtagcatcatcacacgctacgagcgtgactctgctgaaggcttcagaatgtgaa
gagatctttgagggcaatgatgagaaatacaaggcggtgtccatcagcacagagcccccg
gcttacctcagggagcagaaagcaaagaggagcagtcagtgggtccccactctgcccaac
agctctcaccatctcgacgctgtgccttgctccaccaccatcaaccgcaaccgtatgggc
cgtgacaagaagaggaccttccccctgtgctttgacgaccacgaccctgcagtgatccac
gagaacgcagcccaggtggaggcgctcgttcctattcgtctggacatggagatagatgga
cagaagctgcgagatgccttcacttggaacatgaatgagaaactgatgaccccagagatg
tttgcagagattctatgcgatgacctggatctgaatcctctggcctttgtccctgccatt
gcctcagctattcgtcagcagattgagtcctacccaactgacagcatactagaggagcag
gcagaccagagagtcatcatcaagctgaacatccacgtggggaacatctctctggtggac
cagtttgagtgggacatgtcagagagggagaactcgccagagtcttttgccctgaagctg
tgctctgagctcggtttgggaggagagtttgtcaccactattgcctacagcattcgcggt
cagctcagctggcaccagaggacctacgccttcagtgagaacccactccccactgtagag
atcgccatccgcaacacaggtgatgcagaccagtggtgccccctgcttgagaccctcaca
gatgctgaaatggagaagaagatccgagaccaagacaggaacacaaggcgtatgagaaga
ctggctaacaccgctccgtcctggtag
DBGET
integrated database retrieval system
