KEGG   Larimichthys crocea (large yellow croaker): 104928090Help
Entry
104928090         CDS       T04659                                 

Gene name
sdha
Definition
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco00020  Citrate cycle (TCA cycle)
lco00190  Oxidative phosphorylation
lco01100  Metabolic pathways
lco01200  Carbon metabolism
Module
lco_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lco_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lco_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    104928090 (sdha)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    104928090 (sdha)
Enzymes [BR:lco01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     104928090 (sdha)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Thi4 GIDA Pyr_redox_2 FAD_binding_3 DAO HI0933_like
Motif
Other DBs
NCBI-GeneID: 104928090
NCBI-ProteinID: XP_010740614
LinkDB All DBs
Position
XIII
AA seq 663 aa AA seqDB search
MASVRAASRLLSKRILSKTKAVPAVAVQGSRNFHFSIYGKKKNAQVSNDISTQYPVVDHE
FDAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMEADDWRW
HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTEDGKIYQRAFGGQSLKYG
KGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECKGVIALCMED
GSIHRFRAQNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIY
GAGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPDK
DHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGVPTNYKGQA
IIHTDGVDKVVRGLYACGEAACASVHGANRLGANSLLDLVVFGRACALTITEEHKPGESL
SPLQPSAGEESVANLDKLRFANGDLRTSEIRLNMQKTMQAHAAVFRTGSVLKEGCDKMDA
IYQTMDDLKTFDRGIVWNTDLVETLELQNLMLNAVQTIHSAEQRQESRGAHAREDFKDRV
DEYDYSKPIQGQEKKPFEQHWRKHTMSYVDPKTGKVTLEYRPVIDHSLDEQDCAHVPPAI
RSY
NT seq 1992 nt NT seq  +upstreamnt  +downstreamnt
atggcgagtgtccgtgctgcctcccgtctcctctccaagaggatactgtcaaaaaccaaa
gccgtccctgctgttgcagttcaaggctccagaaactttcatttctccatctatggcaag
aagaaaaatgcccaagtgtcaaatgatatctccactcagtacccagttgtcgatcatgag
tttgatgctgtggtggtaggagctggaggagcaggactcagggctgcttttggcctgtca
gaggccggattcaacactgcttgtatcaccaagctcttccccaccagatctcacactgtt
gccgcacagggtggcatcaatgcagctctggggaacatggaggcggatgactggaggtgg
catttctacgatactgtaaagggatcggattggctgggagaccaggacgctatccactac
atgacagagcaggctccagcagctgtagtggagctggaaaactttggcatgccgttcagc
cgcactgaagatggcaagatctaccagagggcctttggaggtcagagtctcaagtatgga
aaaggaggccaagcccaccgatgctgctgtgtagctgacagaacaggacactcattactg
catacactttatggaaggtcgcttcgttatgacaccagttattttgtcgagtactttgct
ctggatctacttatggaaaatggagagtgcaaaggagtgattgctctctgcatggaggat
ggatctattcaccgcttcagagctcagaacactgtcatcgctaccgggggttatggaaga
acatatttcagctgcacatctgcccacaccagtacaggagatggaactgcaatggtgacc
agagctggtctgccctgccaggatttggagtttgtacagtttcatccaactgggatctac
ggagccggttgtctgatcacagagggttgccgtggtgagggagggatcctgatcaacagc
gagggagagcgcttcatggagcgctatgcacccaatgccaaagacctggcctccagagac
gtggtgtcccgctccatgaccatagagatcagagagggaaggggtgtcggtccagacaag
gaccacgtttacctgcagcttcaccatctgcctccccagcagctggccacaagattgcct
ggtatctcagagacagccatgatcttcgctggagttgacgtcacaaaagagcccatcccc
gtgctgcccaccgttcattacaatatgggtggagtccccacaaactacaagggacaggcc
atcattcataccgatggagttgacaaggtggttcgtggtctgtatgcctgtggtgaggcg
gcatgtgccagtgtccacggtgctaaccgcctgggcgctaactctttgctggacctggtg
gtgtttggcagagcctgtgccctcaccatcaccgaggagcacaaacctggagagagcctg
tcccctctgcagcccagcgcaggagaggagtctgtggccaacctggacaagctgaggttt
gccaacggagatctgagaacctccgagatcaggctcaacatgcagaagaccatgcaggcc
catgctgcagtgttccgtaccggctccgttctgaaggagggatgtgacaagatggacgcc
atttaccagaccatggatgacctcaagacatttgacagaggcattgtgtggaacacagac
ctggtggaaacgttggagctgcagaatctgatgctgaacgctgtccagaccatccactct
gctgagcagagacaggagagcaggggcgcccacgccagagaggacttcaaggaccgtgtg
gatgagtatgattactcaaagcccatacagggtcaggagaagaagcccttcgagcagcac
tggaggaaacacactatgtcctacgttgacccaaagactggaaaggtgactctggagtac
cgacctgttattgaccattctctggatgaacaggactgcgcccatgtccctcctgccatc
cgctcctactaa

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