Larimichthys crocea (large yellow croaker): 104931883
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Entry
104931883 CDS
T04659
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104931883
Cell adhesion molecules [BR:
lco04515
]
Cadherins
Protocadherins
104931883
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Ustilago_mating
Motif
Other DBs
NCBI-GeneID:
104931883
NCBI-ProteinID:
XP_010745293
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Position
I:31050492..31067399
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AA seq
1022 aa
AA seq
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MIVLLIVLCITDGVLSQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPSSRSP
YLEVNLENGVLFVNEKIDREQICKQSASCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITNNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLSE
NAPVGTLVIQLNATDLDEGLNGEIVYSFSNHISSRVKDLFSIDPRTGRIEVRGEVDFEES
SLYQIFVQAKDLGPNAVPAHCKVLVKVTDVNDNAPEITFSTVTESVSEKAAPGTVIALLS
VTDRDAEENGQIHVEILGDVPFKLKSSFRNYFTIVTDGPLNREAADSYSVTVVARDKGTP
SLATSKSIRVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDIGQNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVEAKDAGTPELSSNATVKV
IIVDQNDNPPLVLAPLGKNGTAKEPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLLIEVRDHGQPPLSSSASVLVMLVDSVAE
GRGAGDRGSTTKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNIYTCLTS
DCCLGCSSCCSRQGRARKKKLSKSDIMLVQSAGNVSGAGSAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDIISNGSILSNETK
HQRAELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDSVPDTEVFESTEQTADKSFS
TFGKETPLSHQHLLHHQNHHHLLKNHHLSHHQGSLERKELEAFLPSSRAPYNPAYLTRKR
VC
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcttttgattgtcctgtgcatcacggatggagtgctctctcagatacgctac
tctgtgccggaggaggcggaccatggcaccttggtggggaatatcgccgaggacctggga
ctggaccttaccaaactcgcctcgcgccgcttccaggtggtgcccagttctcgatcaccg
tatctggaggtgaacctggagaacggcgtcctgttcgttaacgaaaaaatcgatcgggag
cagatctgcaagcagagcgccagctgccagctcaacatggaggtgttcttggagaacccg
ctcgagctgtttcgggtcgaaattgaggtggtggacattaacgacaacccgcccagcttc
ccggagacagacatcaccgtggagatctcagaaagcgcaactccgggcacccgtttccct
ctggagagcgcgttcgacccggacgtgggctctaacgctttacgcacgtatgatatcacc
aacaacaactacttttatctggacgtgcagactcaaacggacgggaacaagttcgcggaa
ctggtcttggagaagccgctggaccgggagcagcaggcggcgcacaggtacgtgctgaca
gcggtggacggcggacagcctccccggactggcaccgcgctgctggtggtgaaagtgctg
gactctaatgataacgtgccggtgtttgatcagccagtctacacggtgagcctctctgag
aacgcaccggtgggcacgcttgtcatacagctgaacgccaccgacctggacgagggactg
aacggagagatagtttattcctttagtaaccacatctccagccgagtaaaggacctgttc
agtatagacccgcgcaccggacgcatcgaggtgcgcggagaggtggacttcgaggagagc
agtctgtatcagatcttcgtccaagccaaggatctggggccaaacgcagtgcccgcgcac
tgcaaagtgctggttaaagtcaccgacgtgaacgacaatgcaccggagatcaccttcagc
accgtcaccgagtcggtgagcgaaaaagcggctcccggtacagtcatcgcgcttctgagt
gtgactgacagggacgcagaggaaaacggacagatccacgtggagatcctcggcgatgtc
ccgttcaaactaaaatcctctttcaggaattattttaccatagtgaccgacgggccgttg
aaccgggaggcggctgactcctactccgtgactgtggtcgcgcgggataaagggacgccc
tcactcgccaccagtaagtccattcgagtacaggtgtcagatgagaacgacaacgcgccc
acattcacccagcccatatatgatgtgtatgtgacagagaacaacgttccaggggcgtac
atacacgctgtgacggctctggacccggacatcggtcagaacgcgctcatcagctactcc
atattagagtgtgacatccagggcatgtcagtcaaaacctacgtgtccatcaacgaggag
acaggctatctgtacgcactcaggtcctttgattatgagcagctgaaggattttacattc
atggtcgaggccaaagatgcaggcaccccagaactctcctccaacgccacagtcaaagtc
atcattgtggaccagaatgacaacccccctttggtgctggcccccctggggaagaatggc
acagccaaggagcccctgccccgttcagctgagccaggctacctggtgacccgcatcgtg
gccatggacgcggatgatggtgagaatgctcggctgtcctacagcatccagagggggaat
gagaatggcatgttcaggatggactggaggacgggtgaactccggacagcgaggcgggtg
tcggccaagcgagacccccaccagctgtacgacctgctgattgaggtgagagaccacggc
cagccgccgctgtcttccagtgccagtgttctggtgatgttggtggacagtgtggctgaa
ggccgcggcgccggggacaggggaagcaccactaaggctaaagacggcaccctggacctc
actctcattctcatcatcgccctgggctctgtctccttcatcttcctcctggtcatgatc
gtgctggctgtgcgctgccaaaaggacaaaaagctcaacatttacacctgcctgaccagc
gactgctgcctgggctgcagctcatgctgctcaaggcagggccgggctcgcaagaaaaag
ctcagcaagtcggatatcatgctggtgcaaagcgctggtaacgtcagtggagccggttcg
gctcaagtccccgtggaggagtcagggagcttcggctcccaccaccaaaaccagaactat
tgctaccaggtatgtctgactccagagtctgccaaaaccgacctcatgttcctaaagccg
tgtagtccgtctaggagcacagacaccgatcacaacccgtgcggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaatggcagcattttatcaaatgagaccaaa
caccagcgagctgaactcagctacctggttgacaggccgagacgtgtcaacagttcggcg
ttccaggaggctgacctggtcagctccaaagacagcggtcacggagacagtgagcaagga
gacagcgaccacgacgccaccaaccgaggccactcctctggcgccgatctgttctctaac
tgcacagaggagtgtaaggccctgggccactctgatcgctgctggatgccgagctttgtg
ccctctgacgggcgccagggcccggactaccgcagcaacctccacgtgcccggcatggac
tcagtcccggacacagaggtatttgaaagcacagagcaaacggccgataagtcattctcc
acctttggcaaagagacgcctctcagtcaccaacacctcctacaccaccaaaaccaccac
caccttctcaaaaaccatcacctcagccaccaccagggctccctagagaggaaagagttg
gaagcatttctgcctagctccagagcaccttataacccagcttatttaacgaggaaaagg
gtttgctag
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