KEGG   Larimichthys crocea (large yellow croaker): 104936802
Entry
104936802         CDS       T04659                                 
Symbol
per1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104936802 (per1)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    104936802 (per1)
SSDB
Motif
Pfam: Period_C PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 104936802
NCBI-ProteinID: XP_027143579
LinkDB
Position
XIV:complement(4442609..4462859)
AA seq 1443 aa
MSYDNPKSTPSSSTRGRVARAGEKDNDQEAESEGLNSPKTSGGQQGANVGAQQQRSGSGG
GSSPSGGSGSGSSSGDRRGPNSDDMDGLSSGNDSGERESEGGMERENRSHGRQSTHSSHS
SSNGKDSGMMLETTESNKSSNSQSLSPPSGSLAYSLLSTSSEHDPPSTSGCSSDQSARVQ
TQKELMKAIKELKLRLPTERKAKGHSSTLNALKYALQCVKQVRANKEYYHQWSVEECHGC
SLDLSAFTIEELDNITSEYTLKNTDTFSMAVSFLSGRVVYVSPQGSSVLRCKPECLQGTV
FSELLAPQDVSTFYSGTAPCRLPPWASCIGSASPPVDCTQEKSMFCRISADRTQGGEMRY
YPFRLTPYQLTITDSDAAEPQPCCLLIAERVHSGYEAPRIPPDKRIFTTSHTPSCLFQEV
DERAVPLLGYLPQDLVGTPTLLYIHPEDRPMMVAIHEKIFQFAGQPFEYSPLRMCARNGE
YLTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTMPPGCKSRVTTPDVVQLSEQI
HRVLVQPVHSGGSQGYSSLGSSGSRGSRRSHQQHLSASATSSSDSNGPAMDKAAAAVALH
KPMTFQQICKDVHMVKTNGQQMFIESRNRPPPRKNTSTGPTNIRAVTSDPIRGLIADLTK
PPKALVPAPLVQKEAPTGYSYQQINCLDSIIRYLDSCNIPNTVKRKCGSSSCTSTSDDDK
QEASGNNKGGSVSLVGEPPSLPPLTMAAKAESVASVTSQCSFSSTIVHVGDKKPPESDIV
MEEAPTTPTLAPPTTTLTRPTSGLTPPATTAVTPPPLPPPPPPPLPQAAQPERDSRRSGG
GGGRMGLTKEVLSAHTQQEEQAFLDRFKDLSKLRVFDQTAQTTLRCQTPAANPLSRGVRC
SRDYPAAGSSNGHRRGRGGKRLKHQESSDQHSSLGLNRSRHDPRSSAPPMPLNMPLGPPT
NSSSWPSVGSQASIPAAPFAPGMLPIYPVYPPLAQPFPQQVPDPSRFPPTQMVPPMMALV
LPNYMFPQMGAPIPQPAPTPGHFYNPNFTYPVTNPAAIPTMVSNPLPIPGTCAPSRSSTP
QSYSQTPADREGAESPLFQSRCSSPLNLLQLEESPSNRLEVATALAASQQATPTAQGGAA
GGQSSANQENSDDTSKENENGETNESNQDAMSTSSDLLDLLLQEDSRSGTGSAASGSGSS
GTRSSGSGSGSNGCSSSGTSGTSSSQGSHTSKYFGSIDSSENDHLRKQPAGGSSSARGDG
EEQFIKCVLQDPIWLLMANTDDKVMMTYQLPVRDMETVLRQDSEALRSMQKHQPRFTEDQ
KRELSQVHPWIRTGRLPRAINISGCTGCKSPPFVPPTAPFDVEIHEMELCNVLKGQEEGA
DKGKKNLLETAMDEAHPEDEDEEEEVEEKGAKTEDGNQDMPAAEEEEEGATSEAVREKSH
MTH
NT seq 4332 nt   +upstreamnt  +downstreamnt
atgagttatgacaaccctaaatcaacgcccagcagcagcactcgggggcgagtggcgagg
gccggcgagaaagacaatgaccaggaagcagagtccgaagggttaaactctccaaaaacc
agcggcggtcagcaaggtgccaatgtcggcgctcagcagcaacggagcggatctggaggc
ggctcgtctccgagcggagggtcgggatccggaagttcgtccggagaccgaagggggccc
aactcggacgacatggacggactgtccagcgggaacgactcgggcgagagggagagcgaa
ggcggcatggagagggagaacaggtcacatgggcgccagtccacgcacagctcccacagc
tcgtccaacggcaaggactcgggcatgatgctggaaaccacagagagcaacaagagctcc
aactcccagagcctctcccctcccagcggctccctggcctacagcctgctgtctacaagc
tcggagcacgaccccccctccacgtctggctgcagcagcgaccagtcggcgagggtccag
acccagaaagagctcatgaaggccatcaaggagctgaagctgcgtctaccgactgagcgc
aaggccaagggtcactccagcacgttgaatgcactcaaatacgcacttcaatgtgtcaaa
caagtccgagccaacaaggagtattaccatcagtggagtgtagaggagtgtcacggctgc
agtctggacttgtccgccttcacgattgaagagctcgacaacatcacgtcagaatacacc
ctgaaaaacacagacacgttctccatggccgtgtcgttcctgtcaggcagggtcgtgtac
gtatcaccccaaggttcgtccgtgctccgctgtaagcccgagtgtctccaggggaccgtg
ttttccgagctcttggccccgcaggacgtcagcaccttctacagcggcacggcaccctgc
cgcctgccaccctgggcatcctgcatcggatctgcttctcctccagtcgactgcactcaa
gagaagtccatgttctgtcgaatcagtgccgaccggacgcagggcggcgagatgcgctac
taccccttccgcctcacgccctaccagctcaccatcacagactcggacgccgccgagcct
caaccctgctgcctgctcatcgcggagagggtccactctggatacgaagctcctcgcatc
cctccagacaagaggatcttcaccaccagtcacacgcccagctgcctcttccaggaagta
gacgagagggcagtgccattgttaggctacctgcctcaggacttggtgggaacccccacc
ctgctctacatccaccctgaagacaggcccatgatggtggctatacatgagaagatcttt
cagtttgcagggcagccgtttgaatattcacccctgaggatgtgcgcacgcaacggggaa
tatctgaccatcgacaccagctggtcttctttcgtcaacccctggagccggaaggtggca
ttcatcgtcgggcgccacaaagtcagaacgagccctctaaacgaggatgtgttcacgatg
ccgccgggctgcaagagtcgggtcaccacgcccgacgttgtccagctgagcgaacagatc
caccgggtcctggtgcagccggtgcacagcggcggctctcagggctacagctcgctcggg
tccagcggctcgcggggctcacgccgttcgcaccaacagcacctcagtgcctccgccacc
tcgtcaagcgacagcaatggccctgcgatggacaaggccgccgctgcggtcgctttgcac
aaaccgatgacgttccagcagatctgcaaagacgttcacatggtcaaaactaacggacag
cagatgtttatcgaatcccgtaaccggccaccgcccagaaaaaacacaagcacaggccca
acaaacatcagagccgtcaccagtgacccaatcagaggtttgatagctgacctgacgaaa
ccacccaaagctttggtcccagcaccgctcgtacagaaggaggcgcctactggctactcc
taccagcagatcaactgtctggacagcatcataaggtacttggacagctgtaacattcct
aacacggtcaaaaggaagtgcggctcctcctcttgcacctccacgtccgatgacgacaaa
caggaggccagtggcaacaacaaaggtggttcagttagcctcgtaggtgaaccaccttct
ctgccccccctgaccatggccgcaaaggcagagagtgtagcctcagtcacgtcccagtgt
agcttcagcagcaccatcgtgcatgtgggagacaagaagcctcctgagtcagacatcgtc
atggaggaggctcctacaactcccaccctcgctccccctacaacgactctaactcgtccc
accagcgggctgacgccacccgctaccacagccgtcacccctccgccgctacctccccct
ccgccgcctcctctccctcaagcagctcagccagagagggacagcaggagaagtggaggt
ggaggaggccggatgggtctgacaaaggaggtgctctccgcccacacccagcaggaggag
caggcgttcctcgaccgcttcaaggacctcagcaagctgcgggttttcgatcagacggcg
cagacgaccctgcgatgccagaccccagctgccaaccctctgtcacgaggagtgcgttgt
tctcgggattacccagccgcaggaagcagcaacggtcacagacgtggtcgtggcggtaag
agactgaagcaccaggagtcgtccgaccagcacagctctctgggcctgaacaggagccgc
catgaccccagaagcagtgcaccacccatgcctctcaacatgcctcttggcccaccaaca
aactcctcctcctggccgtccgtaggctcccaggccagcattcccgccgccccgttcgct
cctggcatgcttccgatctacccagtttacccgccgctcgcacagcctttcccccagcag
gtcccggatccgtcacgtttccccccgacccagatggtaccacccatgatggccctcgtt
ctgcccaattacatgtttccacagatgggggcgcctatccctcaacccgcccccaccccc
ggacacttttacaacccgaacttcacgtaccccgtcaccaacccggccgctatccccact
atggtttccaaccccttacccattccaggcacctgcgccccgtctcgtagcagcacccca
cagtcctacagtcagacaccagctgaccgcgagggcgcagagtcccccctctttcagtcc
cgatgctcctcaccgctcaacctgttgcaactggaggaatcaccaagcaaccggttagag
gttgccacggcgctggcggcatcacagcaagccacgcctaccgcgcagggcggcgcggca
ggcggacagagctcagccaatcaggagaactccgatgatacctccaaggagaatgagaac
ggtgaaactaacgagtccaaccaagatgccatgtcgacctccagcgacctgctggatctg
ctgctgcaggaagactcccgctcaggcactggctcagctgcttctggttcaggatcctca
gggacgaggtcctctggttcaggctctggctccaacggctgcagctcctctggcaccagt
ggcactagcagcagccagggcagccacaccagcaagtacttcggcagcatcgactcatcg
gagaacgaccatttacgcaaacagccagcaggtggcagcagcagcgcccgaggagacggc
gaggagcagttcatcaagtgcgtcctgcaggacccaatctggctgctgatggccaacact
gatgacaaggtcatgatgacctatcagctgcctgtcagggacatggagactgtgctgcga
caggacagtgaggccctgaggagcatgcagaaacaccagccgcgcttcaccgaggatcag
aagagggagctgagccaggttcacccctggatacgcacaggacgcctgccccgagccatc
aacatctctggatgtaccggctgcaagtctcctcccttcgtgcctcccacagctccgttc
gacgtggagatccacgagatggaactgtgcaacgtgttgaaagggcaggaggagggcgcc
gacaaggggaagaaaaaccttttggagacagccatggatgaagctcatccagaggatgag
gacgaagaagaggaggttgaagagaaaggagccaaaacagaagacggcaaccaagacatg
ccggcagcggaggaggaggaggagggagcgacctcagaagctgtgagagaaaagtctcac
atgactcactaa

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