Lysobacter capsici: LC55x_2083
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Entry
LC55x_2083 CDS
T04162
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcp03009
]
LC55x_2083 (rimO)
Enzymes [BR:
lcp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LC55x_2083 (rimO)
Ribosome biogenesis [BR:
lcp03009
]
Prokaryotic type
ribosomal protein modification factors
LC55x_2083 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALN85358
UniProt:
A0A0S2FP53
LinkDB
All DBs
Position
2305658..2307019
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AA seq
453 aa
AA seq
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MSSASSVSPANPKVGFVSLGCPKALVDSERILTQLRVEGYDIVQTYDDADVVVVNTCGFI
DSAVTESLDAIGEAIAENGKVIVTGCLGKRSELIREAHPDVLSISGPQDYGSVMSAVHKV
LPPKHDPFIDLVPRRDDGIGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDQ
VLREAEKLAMGGVKELLVISQDTSAYGVDVKYAQHEWRGKPYQTRMKALCEGLSELGIWT
RLHYVYPYPHVDEIIPLMADGKLLPYLDIPFQHASPRVLKLMKRPGAVDKTLERIQRWRS
IAPDIAIRSTFIVGFPGETEDEFEELLDFLDEAQLDRVGAFAYSPVDGARANDLPDPIDE
DVKQERLARFMERQAEISANKLEAKVGSVQRCIVDALDGDLAIARSMADAPEIDGLVQIQ
NGLEAQLRVGQFVDVEIMGSDEHDLFGEAVLED
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgccagcagcgtctcgccagccaatcccaaagtcggtttcgtcagcctcggt
tgcccgaaggccctggtcgattccgagcgcatcctcacccagctgcgcgtggagggctac
gacatcgtccagacctacgacgatgccgacgtggtggtggtcaacacctgcggcttcatc
gattcggcggtgaccgaatcgctggacgcgatcggcgaggcgatcgccgagaacggcaag
gtcatcgtcaccggttgcctgggcaagcgctcggaactgatccgcgaagcgcacccggac
gtgctgtcgatcagcggcccgcaggactacggcagcgtgatgagcgcggtgcacaaggtg
ctgccgcccaagcacgatccctttatcgacctggtgccgcgtcgcgacgacggcatcggg
gtcaagctcaccccgaagcactatgcgtatctgaagatctccgagggctgcaatcaccgc
tgcagcttctgcatcattccgtcgatgcgcggcgatctggtctcgcgtccggtcgatcag
gtgctgcgcgaagccgaaaagctcgcgatgggcggggtcaaggaactgctggtgatctcg
caggacacctcggcctacggcgtcgacgtgaagtacgcgcagcacgaatggcgcggcaag
ccgtaccagacccggatgaaggcgctgtgcgagggcctgagcgaactgggcatctggacg
cgcctgcattacgtgtatccctacccgcatgtcgacgagatcattccgctgatggccgac
ggcaagctgctgccgtacctggacattccgttccagcacgccagcccgcgcgtgctcaag
ctgatgaagcgtcccggcgcggtcgacaagaccctggaacgcatccagcgctggcgctcg
atcgccccggacatcgcgatccgcagcaccttcatcgtcggtttcccgggcgagaccgag
gacgagttcgaagagctgctggatttcctcgacgaagcccagctcgaccgggtcggcgca
ttcgcctattcgccggtcgacggcgcccgcgccaacgatctgcccgatccgatcgacgag
gacgtcaagcaggagcggctggcgcgtttcatggagcgtcaggccgagatttcggcgaac
aagctcgaagccaaggtcggcagcgtgcagcgctgcatcgtcgacgcgctcgacggcgac
ctggcgatcgcgcgttcgatggccgacgcgccggagatcgacggtctggtgcagatccag
aacgggttagaagcgcagttgcgcgtcggccagttcgtcgacgtcgagatcatgggcagc
gatgagcatgatctgttcggcgaggcggtgctcgaggattga
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