Lysobacter capsici: LC55x_2871
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Entry
LC55x_2871 CDS
T04162
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00010
Glycolysis / Gluconeogenesis
lcp00020
Citrate cycle (TCA cycle)
lcp00260
Glycine, serine and threonine metabolism
lcp00280
Valine, leucine and isoleucine degradation
lcp00310
Lysine degradation
lcp00380
Tryptophan metabolism
lcp00620
Pyruvate metabolism
lcp00630
Glyoxylate and dicarboxylate metabolism
lcp00640
Propanoate metabolism
lcp00785
Lipoic acid metabolism
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
lcp01120
Microbial metabolism in diverse environments
lcp01200
Carbon metabolism
lcp01210
2-Oxocarboxylic acid metabolism
lcp01240
Biosynthesis of cofactors
Module
lcp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lcp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
lcp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lcp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LC55x_2871 (lpdA)
00020 Citrate cycle (TCA cycle)
LC55x_2871 (lpdA)
00620 Pyruvate metabolism
LC55x_2871 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LC55x_2871 (lpdA)
00640 Propanoate metabolism
LC55x_2871 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LC55x_2871 (lpdA)
00280 Valine, leucine and isoleucine degradation
LC55x_2871 (lpdA)
00310 Lysine degradation
LC55x_2871 (lpdA)
00380 Tryptophan metabolism
LC55x_2871 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LC55x_2871 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcp04147
]
LC55x_2871 (lpdA)
Enzymes [BR:
lcp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LC55x_2871 (lpdA)
Exosome [BR:
lcp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LC55x_2871 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
AlaDh_PNT_C
HI0933_like
FAD_binding_2
DAO
3HCDH_N
FAD_oxidored
FAD_binding_3
Pyr_redox_3
NAD_binding_8
Thi4
Lycopene_cycl
Amino_oxidase
2-Hacid_dh_C
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
ALN86136
UniProt:
A0A0S2FRC4
LinkDB
All DBs
Position
3263884..3265308
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AA seq
474 aa
AA seq
DB search
MSEQFDVVVIGAGPAGYHAAIRAAQLGLKTACIDAALGKDGKPALGGTCLRVGCIPSKAL
LDSSRQFWNLQHLFGEHGISADNAKIDVATMVGRKDKIVKQFTGGIAMLFKANKITPYYG
FGVLHPGNVVKVKQHDGSEVELKGTNVIIAAGSDSIELPFAKFDGDKIVDNVGALDFTEV
PKRLGVIGAGVIGLELGSVWKRLGSEVTILEALPDFLAAADAEVAKTAAKEFKKQGLDIK
LGAKVSKADIQKDGVHLTYNDGKSDQELVVDKLLVAVGRRAASKGLLAEGTGVKLNERGQ
IEVDEHCHTGVDGVWAVGDCVRGPMLAHKGFEEGIAVAELIAGLPGHVNLDTVPWVIYTE
PEIAWVGKTEQQLKAENIPYKTGSFPFAAIGRAVAMGEPAGFVKVIAHAETDRVLGLHLV
GVGVSELVHEGVLTMEFNGSADDLARICHAHPTLSEAIHDAAMAVDKRAIHKAN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcaattcgacgtagtcgtcatcggcgccggccccgccggctatcacgccgcc
atccgcgccgcccagctcggtctgaagaccgcctgcatcgacgcggcgctcggcaaggac
ggcaagcccgcgctcggcggcacctgcctgcgcgtgggctgcatcccgtccaaggcgctg
ctcgacagctcgcgccagttctggaacctgcagcatctgttcggcgaacacggcatcagc
gccgacaacgccaagatcgacgtcgccaccatggtcggtcgcaaggacaagatcgtgaag
cagttcaccggcggcatcgcgatgctgttcaaggcgaacaagatcaccccgtactacggc
ttcggcgtgctgcacccgggcaacgtggtcaaggtcaagcagcacgacggttctgaggtc
gagctcaagggcaccaacgtcatcatcgccgccggttcggattcgatcgaactgccgttc
gccaaattcgacggcgacaagatcgtcgacaacgtcggcgcgctcgacttcaccgaagtg
cccaagcgcctgggcgtgatcggcgccggcgtgatcggcctggaactgggcagcgtgtgg
aagcgcctgggttcggaagtcaccatcctcgaagccctgcccgacttcctcgccgccgcc
gatgccgaagtcgccaagaccgcggccaaggaattcaagaagcagggcctggacatcaag
ctcggcgcgaaggtcagcaaggccgacatccagaaggacggcgtgcacctgacctacaac
gacggcaagtccgatcaggaactggtcgtcgacaagctgctcgtcgcggtcggccgtcgc
gccgcctcgaagggcctgctcgccgaaggcaccggcgtcaagctcaacgagcgcggccag
atcgaagtcgacgaacactgccacaccggcgtcgacggcgtgtgggcggtcggcgactgc
gtgcgcgggccgatgctggcgcacaagggcttcgaggaaggcatcgcggtcgccgaactc
atcgccggcctgccgggccacgtcaacctcgacaccgtgccgtgggtgatctacaccgag
ccggaaatcgcctgggtcggcaagaccgagcagcagctcaaggccgagaacatcccgtac
aagaccggcagcttcccgttcgcggcgatcggccgcgcggtggcgatgggcgagccggcc
ggcttcgtcaaggtcatcgcccacgccgagaccgatcgcgtgctgggcctgcacctggtc
ggcgtcggcgtgtccgaactcgtgcacgaaggcgtgctgaccatggagttcaacggctcc
gccgacgacctcgcgcgcatctgccacgcccacccgaccctgtcggaagcgatccacgac
gcggcgatggcggtcgacaagcgcgcgattcataaggccaattaa
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