Lysobacter capsici: LC55x_4248
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Entry
LC55x_4248 CDS
T04162
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcp03009
]
LC55x_4248
Enzymes [BR:
lcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LC55x_4248
Ribosome biogenesis [BR:
lcp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC55x_4248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALN87498
UniProt:
A0A0S2FVG5
LinkDB
All DBs
Position
complement(4711425..4712399)
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AA seq
324 aa
AA seq
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MTSPRQTLTATVPDSAAGRRFDAVLAELFPDYSRSRLAAWIKSGDARLNGQEVRPRDPVQ
GGESVELNVVLDTQTHAVAEDIALDILYEDSEVIVLDKPAGLVVHPGAGNPAGTLVNALL
HHDPGLSALPRAGIVHRLDKDTSGAMVVARTLPAHTSLVEQLSARDVHRQYLAVVVGALV
SGGTANAAIDRHPRDRLRMGVREDGKDAVTHYRLRERFRAHTLLECRLETGRTHQIRVHM
QHLKHPIVGDPLYGGPLKLPKGATEGLVETLRGFKRQALHAETLEFKHPASGEPIRCTAP
VPADLQRLIAELRADTRAAVEAGR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaccccgccagaccctgaccgccaccgttcccgacagcgccgccgggcgccgt
ttcgacgcggtgctcgccgagctgttccccgactattcgcgctcgcggctggcggcctgg
atcaaatccggcgacgcccgcctgaacgggcaggaggtgcgcccgcgcgatccggtccag
ggcggcgagtcggtcgaactcaacgtcgtgctcgacacccagacccacgcggtcgccgaa
gacatcgccctggacatcctgtacgaggacagcgaggtgatcgtgctggacaagccggcc
gggctggtcgtgcatcccggtgccggcaatccggccggcaccctggtcaacgcgttgctg
caccacgacccgggcctgtcggcgctgccgcgcgccggcatcgtccatcgtctcgacaag
gacacctccggcgcgatggtggtggcgcggaccctgccggcgcatacctcgctggtcgaa
cagttgtcggcgcgcgacgtgcatcgccagtacctggcggtggtggtcggcgcgctggtg
tccggcggcaccgccaatgccgcgatcgaccgccacccgcgcgaccgcctgcgcatgggc
gtgcgcgaggacggcaaggacgcggtcacccattaccgcctgcgcgaacgcttccgcgcc
cacaccttgctggagtgccgcctggaaaccggccgcacccaccagatccgcgtgcacatg
cagcacctcaagcatccgatcgtcggcgacccgctgtacggcggcccgctcaagctgccc
aagggcgcgaccgaggggctggtcgagaccttgcgcggcttcaagcgccaggccctgcac
gcggaaaccctggaattcaagcaccccgccagcggcgagccgatccgttgcaccgcgccg
gtgccggccgacctgcagcggctgatcgccgaactgcgcgccgacacccgcgcggcggtc
gaggccgggcggtga
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integrated database retrieval system
