Lysobacter capsici: LC55x_4255
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Entry
LC55x_4255 CDS
T04162
Name
(GenBank) bacterial regulatory, Fis family protein
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
lcp
Lysobacter capsici
Pathway
lcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC55x_4255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lcp02022
]
LC55x_4255
02035 Bacterial motility proteins [BR:
lcp02035
]
LC55x_4255
Two-component system [BR:
lcp02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LC55x_4255
Bacterial motility proteins [BR:
lcp02035
]
Pilus system
Twitching motility proteins
LC55x_4255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_16
HTH_50
AAA_5
Mg_chelatase
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ALN87505
UniProt:
A0A0S2FVF9
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All DBs
Position
4720100..4721509
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AA seq
469 aa
AA seq
DB search
MAETRSALVVDDERDIRELLVMTLGRMGLRCDTASGLGEARSQLLRNSYDLCLTDMRLPD
GSGMDLIAEISQKYPNTPVAMITAFGNVEAAVDALKAGAFDFVAKPVDLAVLRDLVRHAL
ELNDTRRSASEAVGSRLYGESPAMIKLRQTIGKVARSQAPVYIAGESGVGKELVARTIHS
EGGRADGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAADGGTLFLDEVAE
LPLPMQVKLLRAIQEKSIRPVGAQAELVVDVRILSATHKDLAALVADGRFRQDLYYRINV
IELRVPPLRERLDDLPGLASKILHRLAGNQGRPVPRLGEDALEALRAYGFPGNVRELENI
LERALALAEGEVLNASDLRLPRLSTQPPPLPAHAVQAGNPSPQPGAVDPRTLNPRDTATS
ALPSYIEEIERAAIQQALQENRYNKTRTAAALGITFRALRYKLKKLGID
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacacgtagtgcattggtagtcgacgacgagcgcgatattcgcgagctgctc
gtcatgaccttgggccggatgggcctgcgttgcgacaccgcgtcgggcctcggcgaggct
cgcagccagctgctgcgcaacagttacgacttgtgcctgaccgacatgcgcctgcccgac
ggctcgggcatggacctgatcgccgagatcagccagaagtatccgaacactccggtagcg
atgatcaccgccttcggcaacgtcgaagccgcggtcgacgcgctcaaggccggcgccttc
gatttcgtcgccaaacccgtcgacctggcggtgctgcgcgatctggtgcggcacgcgctc
gaactcaacgacacccgccgcagcgccagcgaagcggtgggttcgcgcctgtacggcgag
tcgccggcgatgatcaagttgcgccagaccatcggcaaggtcgcgcgcagccaggccccg
gtgtacatcgccggcgagtccggcgtcggcaaggaactggtcgcgcgcaccattcattcc
gaaggcggccgcgccgacggtccgttcgtgccggtcaactgcggcgcgatcccggccgag
ctgatggaaagcgaattcttcggccacaagaaaggcagcttcaccggcgcccacgccgac
aagcccggcctgttccaggccgccgacggcggcaccttgttcctcgacgaagtcgccgag
ctgccgctgccgatgcaagtcaagctgctgcgcgcgatccaggaaaagtcgatccgcccg
gtcggcgcgcaagccgaactggtggtcgacgtgcgcatcctctcggcgacccacaaggac
ctcgccgcgctggtcgccgacggccgcttccgtcaggacctttactaccgcatcaacgtc
atcgagctgcgcgtgccgccgttgcgcgaacggctcgacgacctgcccggcctggcctcg
aagatcctgcaccggctcgccggcaaccagggccggccggtaccgcgactgggcgaggac
gcgctcgaagccctgcgcgcctatggcttcccgggcaacgtgcgcgaactggaaaacatc
ctcgaacgcgccctggccctggccgaaggcgaagtcctcaacgccagcgacctgcgcctg
ccgcgcctgtcgacccagccgccgccgttgccggcccacgcggtccaggccggcaaccca
tcgccgcagcccggcgccgtcgacccgcgcaccctcaacccgcgcgacaccgcgaccagc
gccctgccctcgtacatcgaggaaatcgagcgcgccgcgatccagcaggcgctgcaggaa
aaccgctacaacaagacccgcaccgccgcggccctgggcatcaccttccgcgcgctgcgc
tacaagctcaagaagctcgggatcgattga
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