KEGG   Lysobacter capsici: LC55x_4269
Entry
LC55x_4269        CDS       T04162                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
lcp  Lysobacter capsici
Pathway
lcp00470  D-Amino acid metabolism
lcp00550  Peptidoglycan biosynthesis
lcp01100  Metabolic pathways
lcp01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LC55x_4269 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LC55x_4269 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    LC55x_4269 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lcp01011]
    LC55x_4269 (ddl)
Enzymes [BR:lcp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     LC55x_4269 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:lcp01011]
 Precursor biosynthesis
  Amino acid ligase
   LC55x_4269 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp ATP-grasp_3 ATPgrasp_ST RimK GARS_A ATP-grasp_5
Other DBs
NCBI-ProteinID: ALN87519
UniProt: A0A0S2FV90
LinkDB
Position
complement(4738866..4739843)
AA seq 325 aa
MSSQFAPLRVTDPAVFGRVAVLMGGTSAEREVSLDSGRGVLEALRSRGVDAFAVDGIPAL
IEAIRVGSVDRVFNILHGNKGGGEDGVLQGVLEAFGVPYTGSDVLGSALAMDKIRTKQVW
MSAGLPTPRYRRIAKGDDVHAAAKAIGLPVIIKPSSEGSSVGVSRVLKDADIDEAVELAA
RYPGEMLMEQMVIGDELTVAVLINGEGYTALPSIRIVPKGEWYDYHAKYIADDTQYLCPG
LEGVDEAEIRRMAMEAFVAAGCKGWGRVDVMRDRDSGQMYLIEVNTAPGMTSHSLVPKAA
RQVGIEYDELCWRVLEATVQGGATA
NT seq 978 nt   +upstreamnt  +downstreamnt
gtgagttcgcagtttgccccgctccgcgtcaccgatccggccgtgttcggccgcgtcgcc
gtgctgatgggcggcaccagcgccgagcgcgaggtgtcgctggattccggccgcggcgtg
ctcgaagcgctgcgctcgcgcggcgtggacgcgttcgcggtcgacggcattccggcgttg
atcgaagccattcgcgtgggcagcgtcgatcgcgtgttcaacatcctgcacggcaacaag
ggcggcggcgaagacggcgtgctgcagggcgtgctcgaagcgttcggcgttccctacacc
ggttcggacgtgctcggttcggcgttggcgatggacaagatccgcaccaagcaggtgtgg
atgtcggccggcctgccgaccccgcgttatcgccgcatcgccaagggcgacgacgtgcat
gcggcggcgaaggcgatcggcctgccggtgatcatcaagccgtccagcgaaggctccagc
gtcggcgtgtcgcgcgtgctcaaggacgccgacatcgacgaagcggtcgaactggccgcg
cgctatcccggcgaaatgctgatggagcagatggtgatcggcgacgaactcaccgtcgcg
gtgctgatcaacggcgagggctacaccgcgctgccgtcgatccggatcgtgcccaagggc
gagtggtacgactaccacgccaagtacatcgccgatgacacccagtacctgtgtccgggc
ctggaaggcgtcgacgaggccgaaatccgccgcatggcgatggaagccttcgtcgccgcc
ggctgcaagggctggggccgggtcgacgtgatgcgcgaccgcgacagcggacagatgtat
ctgatcgaggtcaacaccgcgccgggcatgaccagccattcgctggtgcccaaggccgcg
cgtcaggtcggtatcgaatacgacgagctgtgctggcgcgtgctcgaggcgaccgtgcaa
ggaggtgcgacggcgtga

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