Lysobacter capsici: LC55x_4269
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Entry
LC55x_4269 CDS
T04162
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00470
D-Amino acid metabolism
lcp00550
Peptidoglycan biosynthesis
lcp01100
Metabolic pathways
lcp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LC55x_4269 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LC55x_4269 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LC55x_4269 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lcp01011
]
LC55x_4269 (ddl)
Enzymes [BR:
lcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LC55x_4269 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
lcp01011
]
Precursor biosynthesis
Amino acid ligase
LC55x_4269 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
RimK
GARS_A
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ALN87519
UniProt:
A0A0S2FV90
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All DBs
Position
complement(4738866..4739843)
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AA seq
325 aa
AA seq
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MSSQFAPLRVTDPAVFGRVAVLMGGTSAEREVSLDSGRGVLEALRSRGVDAFAVDGIPAL
IEAIRVGSVDRVFNILHGNKGGGEDGVLQGVLEAFGVPYTGSDVLGSALAMDKIRTKQVW
MSAGLPTPRYRRIAKGDDVHAAAKAIGLPVIIKPSSEGSSVGVSRVLKDADIDEAVELAA
RYPGEMLMEQMVIGDELTVAVLINGEGYTALPSIRIVPKGEWYDYHAKYIADDTQYLCPG
LEGVDEAEIRRMAMEAFVAAGCKGWGRVDVMRDRDSGQMYLIEVNTAPGMTSHSLVPKAA
RQVGIEYDELCWRVLEATVQGGATA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcgcagtttgccccgctccgcgtcaccgatccggccgtgttcggccgcgtcgcc
gtgctgatgggcggcaccagcgccgagcgcgaggtgtcgctggattccggccgcggcgtg
ctcgaagcgctgcgctcgcgcggcgtggacgcgttcgcggtcgacggcattccggcgttg
atcgaagccattcgcgtgggcagcgtcgatcgcgtgttcaacatcctgcacggcaacaag
ggcggcggcgaagacggcgtgctgcagggcgtgctcgaagcgttcggcgttccctacacc
ggttcggacgtgctcggttcggcgttggcgatggacaagatccgcaccaagcaggtgtgg
atgtcggccggcctgccgaccccgcgttatcgccgcatcgccaagggcgacgacgtgcat
gcggcggcgaaggcgatcggcctgccggtgatcatcaagccgtccagcgaaggctccagc
gtcggcgtgtcgcgcgtgctcaaggacgccgacatcgacgaagcggtcgaactggccgcg
cgctatcccggcgaaatgctgatggagcagatggtgatcggcgacgaactcaccgtcgcg
gtgctgatcaacggcgagggctacaccgcgctgccgtcgatccggatcgtgcccaagggc
gagtggtacgactaccacgccaagtacatcgccgatgacacccagtacctgtgtccgggc
ctggaaggcgtcgacgaggccgaaatccgccgcatggcgatggaagccttcgtcgccgcc
ggctgcaagggctggggccgggtcgacgtgatgcgcgaccgcgacagcggacagatgtat
ctgatcgaggtcaacaccgcgccgggcatgaccagccattcgctggtgcccaaggccgcg
cgtcaggtcggtatcgaatacgacgagctgtgctggcgcgtgctcgaggcgaccgtgcaa
ggaggtgcgacggcgtga
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