Lacticaseibacillus paracasei BD-II: LCBD_1148
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Entry
LCBD_1148 CDS
T01955
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCBD_1148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_1148
Enzymes [BR:
lcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LCBD_1148
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LCBD_1148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AEA56646
UniProt:
A0A806EA76
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All DBs
Position
complement(1113903..1114661)
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AA seq
252 aa
AA seq
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MKLISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELDLPGYHQYFNYAERK
GYSGTAIFTKHEPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYRQ
QWDKDFLAYTNQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQLDS
GFIDTFRNLYPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKILTDIMGSD
HCPVELVTKDLI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatttcttggaacgtgaatggcttacgagctgttttaaaaaaagattttatg
actatttttaatgaattagacgccgactggttctgtttgcaggaaaccaaaatgcaggca
ggccaagttgaactcgatctgcctggctatcatcaatactttaactacgccgaacgcaaa
ggctattctggtacggccattttcaccaaacatgaaccgctcaatgtcacgtatgggatg
ggcgttcctgaacatgatactgaaggccggatcattaccttagagtatccaaacttctat
ttgatgacggtttatacgccgaactctggtggtgaactgaagcgtctggattaccgccag
caatgggacaaagattttcttgcctacacgaaccaactcgcggccaaaaagccgctcgtt
tactgcggcgatttaaatgttgcgcaccaagaaatcgaccttaaaaatgacaagaccaat
caccacaacgccggctttaccgatgaagaacgggctgactttacaaaacaattagatagc
ggctttatcgatacattccggaacttgtatccagataccgtcacttactcatggtggagt
tatcgattccatgcccgcgctaataacgctggttggcgtatcgactactttgtcagcagc
cgtgacttcaaaccatatattcaggatgcaaaaattctgaccgacattatgggcagtgac
cactgtccagttgaacttgtcacaaaagacttgatttag
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