Lacticaseibacillus paracasei BD-II: LCBD_2376
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Entry
LCBD_2376 CDS
T01955
Symbol
cydC1
Name
(GenBank) Putative ABC transporter
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCBD_2376 (cydC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcs02000
]
LCBD_2376 (cydC1)
Transporters [BR:
lcs02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LCBD_2376 (cydC1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_16
RsgA_GTPase
SMC_N
MFS_1
ATP-synt_ab
NACHT
AAA_22
AAA_29
AAA_24
AAA_35
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEA57871
UniProt:
A0A806EVJ3
LinkDB
All DBs
Position
complement(2328914..2330641)
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AA seq
575 aa
AA seq
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MHWLKNEHWVRPDLKRYRGLLFWSLILGIMTFVFAGALMFTSGFLIDKSATKPLFAAIYV
TVVLTRAFGIGRPVFQYIERLTSHNWVLRITSHMRRKLYKVLETDAAFVSEHHQTGDILG
LLADDIGHIQNLYLRMIFPTVVGAGLTVIATLLLGWFNWGFALWIMLLLLFQVLILPWWG
LVVERFRKAEQKQLNHDAYVSLTDSVLGLSDWVITHREKDFMSQSLAAPKKLAASTVKSK
RFQWRRDFVGQLLFVLIVISMLIWTNLEWTGNQASANWVGAFVLVVFPLDQAFSGIAQGV
GEWPTYRDAIRHLNDLQPVTRQLPQQQAVPTQFKEMTLQHLSFQYTPKDPELITDIDLTV
HSGEKIAILGPSGMGKTTLLQLVLGDLTPTTGNVLIDGQDVLTYQQHRTNLFAVLDQSPF
LFNTSIVNNVRLGNEQASDADVAAALKAVKLDQLVAQLPNGINSSVEEAGFGFSGGERQR
LSLARILLQDAPIVLLDEPTVGLDPITEQALLETMFTVLQGKTILWVTHHLQGVNQTDRV
IFLEDGRLTMNDTPSHLAKNDERYQNLYALDAGLR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcattggttgaaaaatgagcactgggttcgcccagacttgaaacgctatcgcggctta
ctcttctggtcgttaattctggggattatgacctttgtctttgctggtgccttgatgttc
acgtcaggttttctgattgataaaagtgccacgaagccattgtttgcagctatttatgtc
acggttgtcttgacccgcgcttttgggattgggcgaccggtgtttcaatacattgaacgg
ttgaccagtcacaactgggtgttgcgcattactagccacatgcggcgaaaattgtacaaa
gtgttggaaactgatgctgcctttgtgtccgaacatcatcaaaccggcgatattctaggc
ttgctcgccgatgacattggtcacattcagaatctatacttgcggatgatttttccaact
gtggtcggcgctggtctaacggttattgccaccttgttgctaggctggttcaactggggc
tttgcactatggattatgttgttgctgttgtttcaagtattgattctgccttggtgggga
ctggtagttgagcgttttcgaaaggcagaacaaaagcaattgaatcatgatgcctatgtc
tcattgacggattcagtgctcggtttgtccgattgggtcattactcatcgcgaaaaggat
tttatgtctcaaagtctggcggcgcctaaaaaattggccgcatcgacggtgaagtccaag
cggtttcaatggcgccgagactttgtcggccaactgctgtttgtcttaattgtcattagt
atgttgatctggacaaaccttgagtggaccggtaatcaagcgagtgctaactgggttggg
gcgtttgtactggttgttttcccactcgatcaggcgttttccggcatcgcacaaggggtt
ggcgaatggccgacataccgagatgcgattcgtcatctcaacgatttgcagccggtcacg
cgacaattaccgcaacaacaagcagtaccgactcagttcaaagagatgacattgcagcat
ctcagttttcaatacacgccaaaagatcctgaattaattaccgatattgatctaaccgtt
cacagcggcgagaaaattgcgattctcggacccagtggcatgggcaaaaccacgttgttg
caactggtccttggtgacctaacgccgacaactggcaacgtgttgatcgacggtcaagat
gtcctgacttatcagcagcatcgcaccaatctttttgcggtgttggatcaaagtccgttt
ttattcaacacgtcgattgtcaacaatgtccgcttaggcaatgagcaggccagcgatgct
gatgttgccgctgctcttaaggcagtcaagctagaccagctcgtagcccaattgccgaat
ggtattaacagcagtgtcgaggaagcaggtttcggcttttcaggtggtgaacggcaacgt
ttgtcgctagctcgaattcttttacaggatgcgccgattgtgctgttggatgaaccgaca
gtcggccttgatccaattacggaacaggctttgctggagacgatgttcacagtattgcaa
ggcaaaaccattctttgggtgacgcatcatttgcaaggcgtcaatcaaactgatcgcgtc
atttttcttgaagatggccgtttgacgatgaatgatacccctagtcacttggctaagaac
gacgagcggtatcagaacttgtatgctttggatgcggggctacggtga
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