Lacticaseibacillus paracasei W56: BN194_18040
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Entry
BN194_18040 CDS
T02337
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
lcw
Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcw03009
]
BN194_18040 (rsmB)
Enzymes [BR:
lcw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
BN194_18040 (rsmB)
Ribosome biogenesis [BR:
lcw03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BN194_18040 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Methyltr_RsmF_N
Methyltransf_25
Methyltransf_15
FtsJ
Methyltransf_11
Methyltransf_24
Met_10
UPF0020
GCD14
Methyltransf_3
Tricorn_PDZ
Cons_hypoth95
CMAS
Motif
Other DBs
NCBI-ProteinID:
CCK22751
UniProt:
K0MW45
LinkDB
All DBs
Position
complement(1783863..1784891)
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AA seq
342 aa
AA seq
DB search
MAKKLGHQGIAKFVTGVLRNAQRTGFPDPAAIADPVKRLSIESSTPVWLVEKLTAQLGEP
KTRAILNVINVPAHASLRVNTTKITPAALLASLKPEFPDLKESPLTPIGLIAPSGHLAGT
SAFVKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALD
LHANKVRLINKNAKRLGLTDRIHAQVLDARKVATTFPANSFDKILVDAPCSGLGLIRRKP
EIKYTKTPEDPAHLQQIQLAILNSVAPTLKIGGRLTYSTCTMVKEENQDVVAQFLAAHPE
FEQVSVPTLKPLHKAHNAPALQLFPDDYDTDGFFIASLIRRK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
attgccaagaaacttggacatcaaggaatcgccaaatttgtgactggggttttgcgaaat
gctcagcgaactggttttcctgacccagccgcaatcgctgatcctgtgaagcgattgtca
atcgaaagcagtacgccggtgtggcttgttgaaaaattgacggcacaactgggtgaaccg
aaaacccgtgccattttgaatgtcatcaatgtcccagcgcatgcttcactgcgcgtcaac
acgacgaaaatcaccccagctgccttgcttgcttctttaaagccggaattccccgatttg
aaggaaagtcctttgaccccaattggcctcattgcacctagtggccacttagcagggaca
tccgcatttgtcaaaggtgagtatacgatgcaagatgaaagttcgatgctggtggcccca
agtctagacatccagcctggggatgttgttttggatgcttgtgccgctcctggcggtaaa
accacccacattgctcagtatcttgatccaaaacaaggcggacaagtgacggcgcttgat
ctgcacgccaacaaagtgcgtttgatcaataaaaatgctaaacgcctgggcttgacggat
cgcatccatgcgcaggtgctggatgcacgtaaggttgcgacaacatttcctgccaattct
tttgacaaaattttggtggatgccccttgttccggattaggtttaattcgacgtaaaccg
gaaatcaagtacacaaaaacgcctgaagatccggcgcatttacaacaaattcagctagca
atcttaaatagtgtggcaccaaccttaaaaatcggtggccgcctgacgtatagtacatgt
acaatggtgaaagaagagaatcaagatgtggttgcacaatttttggcggctcatcctgag
ttcgagcaagtttcagtaccaaccttgaagccattgcacaaggcgcataacgcaccagcg
ctgcaactgtttccagatgattatgatacagacggatttttcattgccagtttgattcgt
cgcaaatga
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