Lacticaseibacillus casei 12A: LCA12A_2116
Help
Entry
LCA12A_2116 CDS
T03665
Name
(GenBank) ATP-binding component of an ABC superfamily transporter
KO
K02003
putative ABC transport system ATP-binding protein
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcx02000
]
LCA12A_2116
Transporters [BR:
lcx02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
LCA12A_2116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_18
SMC_N
AAA_22
AAA_16
AAA_28
nSTAND3
RsgA_GTPase
KAP_NTPase
cobW
DO-GTPase2
NB-ARC
MMR_HSR1
MobB
AAA_23
Motif
Other DBs
NCBI-ProteinID:
EKP98446
LinkDB
All DBs
Position
complement(1934436..1935194)
Genome browser
AA seq
252 aa
AA seq
DB search
MDKQPVVTVDNVTKTYGKKGEKQTPALKGVSFEVQPGEFVGIMGASGSGKTTLLNILSTL
DTPTSGSVLIKGADVTKLKGDALSDFRAKKIGFIFQDFNLLENLTGRENIALPLALQNVS
AKKQAAAVDSIAQTLGINEVLDHYPTELSGGQKQRVAAARALVQKPDILFGDEPTGALDS
KSARELLDTMEQLNKEQDVSILLVTHDPFSASYASRILFIKDGQIGSELVHGDKSQEAFY
QEILDTLGTFQK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcaacctgtcgtaactgttgacaacgttacgaaaacctatggtaaaaaaggg
gaaaaacaaacacccgcattgaaaggtgtcagtttcgaagtacaacccggtgaattcgtc
ggcatcatgggcgcatcaggttcagggaaaacgaccttgcttaatatccttagtacgtta
gatacaccgacttctggctccgttttgatcaaaggtgctgacgtcacaaaattaaaaggg
gatgccttatcagattttcgagctaaaaaaatcggtttcattttccaagattttaatttg
ttggagaacctaactggccgcgaaaatattgccctaccgctcgcgttgcaaaatgtgagt
gcgaagaagcaagcggcggctgttgatagcattgcccaaacattaggaatcaatgaagta
ctcgaccactatccaacggagttatctggtggtcaaaaacaacgagttgccgctgcccgg
gcgttggtgcagaagccagatatcctgttcggggatgagccgacgggtgctttggattct
aagtcagcccgtgagttattggataccatggaacagttgaataaggaacaagatgtctct
atcttgttggtcacccatgatccgttttcggctagttatgccagccgtattttgttcatt
aaagatgggcaaatcggttccgagctggtccatggtgataagagtcaggaagccttctat
caggagattcttgacacacttggcacatttcaaaagtaa
DBGET
integrated database retrieval system
