Lacticaseibacillus paracasei Zhang: LCAZH_1544
Help
Entry
LCAZH_1544 CDS
T01280
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Pathway
lcz03410
Base excision repair
lcz03430
Mismatch repair
lcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCAZH_1544
03430 Mismatch repair
LCAZH_1544
03440 Homologous recombination
LCAZH_1544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcz03400
]
LCAZH_1544
DNA repair and recombination proteins [BR:
lcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LCAZH_1544
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LCAZH_1544
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LCAZH_1544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADK18775
LinkDB
All DBs
Position
complement(1508542..1510836)
Genome browser
AA seq
764 aa
AA seq
DB search
MTQYQWQLAPQPAAADAHALSETLGVPPFLATLLLQRGINDQADYEAFVHPDTSRLHDPF
ALHDMDKAVARILKAIEQNEKITIYGDYDVDGLTSSAIMLETLQSLGADPDVFIPDRFTD
GYGPNAEVYAYLQKTGTQLVITVDNGVAGAAVIDPAQAAGMDVVVTDHHELPAKLPHAVA
VVHPRHPDGDYPFGDLSGAGVAFKVATALLGEPPLESVDLAALGTIADLVSLTDENRVIA
QLGLKMIQTQPRVGLAAILKEAGVAPETVNETTVGFVIGPRLNALGRMGDANPGVTLLTT
FEDDVAAELAEQVGKLNQERQGLVAKIAQEALTMAQAPENQAAKTLLLASKGWHEGVVGI
VASKVVEATGKPTLIMNIADDGETAKGSGRSIEAYHLFKALEPAKEHMVHFGGHHMAVGL
TAKTTDLPAIHAQMEAAAATMLKTVPKPTLPIATRLEDADLTLDHYQLIRQLAPFGQGNP
EPVFSVRPQAIQNVKQIGKENNHLRFQIDQGINVIGFGYGDAAETLATAQTVKLAVQLDQ
NTWQGNTSLQLMLKDYEVKQPQVIDWRMPTIDGGQFKASRTYVFFDAKVKQQFERQFSFG
GPTTIAAQVQTPLANAVLVDLPKDAAALHQVMQYVQPPVAVMFYGAPSRLVAIPTRAEFG
AVLRFLKAHPGFDKHHIPAIAKAVHLTVHQVILAVQVFFELDFVTIEGAFISPVTAPAKK
PLQTAKAYAARAAFLDLAQQLQTMPRAQLETMLLTEHSDSEVES
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtatcaatggcaactcgccccacaacctgcagcagctgatgcacacgcgctt
agcgagacattgggtgtcccaccatttttagcgaccttgttgctgcaacgcgggattaat
gatcaggcagattatgaagcgttcgtgcacccagacactagtcgattgcatgatccattc
gccttgcatgacatggataaagccgttgcccggattttgaaggcaattgagcaaaatgaa
aaaatcacgatttatggcgattacgatgttgatgggttgaccagcagtgccatcatgctt
gagaccttgcaaagtctgggcgccgatccggatgtgtttattcctgatcgcttcaccgat
ggttatgggccgaatgccgaagtttatgcttatttgcaaaaaactggcacacagttggta
atcaccgttgataacggtgtggctggtgccgcagtcatcgatccggcacaggctgcaggc
atggatgtggtggtgaccgatcatcacgagttgccagcaaagttgccgcatgcggttgcc
gttgttcatccacggcatccagatggcgattatccgttcggtgatctttctggggctggc
gttgcctttaaggttgcaacggccttattaggcgaaccaccgttagaaagcgttgacttg
gcagctttgggtaccattgctgatctggtcagcttaaccgatgaaaatcgtgtgattgcg
caattgggcttaaaaatgatccagactcagccgcgggttgggcttgcggctattttaaag
gaagctggtgttgccccggaaaccgtgaatgaaacaacggtcggttttgtcatcggaccg
cggttgaatgcacttgggcggatgggcgacgcgaatcctggcgtaacgttgctgacgaca
tttgaggatgacgtagcggctgagttggccgaacaagtcggcaagctaaatcaggaacga
caaggattagttgcaaagatcgctcaggaagccttgacgatggcacaggcaccggaaaac
caagcggccaaaacattattgctggccagtaaaggttggcatgaaggggttgtcgggatt
gtggccagcaaggttgtcgaagcaacaggcaagccaacgttaattatgaacattgcagat
gatggcgaaactgccaaaggctcaggtcgctcgatcgaggcttatcatcttttcaaagct
ttagagccagcaaaggaacacatggtccattttggcggccatcatatggcagtcggtctc
acagctaaaacaacggatttaccagcgattcatgcgcagatggaggcggctgcggcgaca
atgctgaaaactgttccgaaaccaacgttgcctatcgcaacgaggctggaagacgctgat
ttgacattggatcactatcaattgatccgtcagttggcaccgtttggtcaaggcaatccc
gaaccggttttctcagtacgcccgcaagctatccaaaatgtgaaacagattggtaaagaa
aacaatcacttgcgttttcaaatcgatcaaggcatcaatgtgatcggttttggctatggt
gatgctgctgaaacactggcaactgcacagaccgtgaaattggcggttcagctggatcag
aatacctggcaaggtaacactagtctgcagctcatgttgaaagactatgaagtcaaacaa
ccgcaagtcattgactggcggatgccaacgattgacggtggccagttcaaagccagtcgc
acttatgtgttctttgatgcgaaagtcaagcaacagtttgaacggcaattttcctttggt
gggccaacgaccatcgcggctcaagttcaaacgccgttagcgaatgcggttttagtcgac
ttgccaaaggatgctgccgcgttgcatcaggtgatgcagtatgtgcagccgcctgttgcc
gtcatgttttatggcgcaccaagccgcttggttgctataccgacgcgggcagaatttggg
gccgtgttgcgttttctgaaggcccatcctgggttcgacaagcatcacattccagcgatt
gctaaggcggtccatttaaccgtccatcaagtgatcttggcggttcaggtgttttttgaa
ctcgattttgttacaatagagggtgcttttatttctccagtcacagccccggcgaaaaag
ccgctgcaaacggcgaaagcttatgcagcgcgtgcagcctttctagatctggcgcaacag
ttacagaccatgccgcgcgctcagcttgaaaccatgttgctgacggagcattcagacagt
gaggtagaatcatga
DBGET
integrated database retrieval system
