Lactobacillus delbrueckii subsp. bulgaricus ND02: LDBND_0332
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Entry
LDBND_0332 CDS
T01360
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lde
Lactobacillus delbrueckii subsp. bulgaricus ND02
Pathway
lde03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lde00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDBND_0332 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lde03021
]
LDBND_0332 (rpoC)
03400 DNA repair and recombination proteins [BR:
lde03400
]
LDBND_0332 (rpoC)
Enzymes [BR:
lde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDBND_0332 (rpoC)
Transcription machinery [BR:
lde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LDBND_0332 (rpoC)
DNA repair and recombination proteins [BR:
lde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LDBND_0332 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
ADQ60383
LinkDB
All DBs
Position
346773..350438
Genome browser
AA seq
1221 aa
AA seq
DB search
MIDVNKFESMQIGLASPNKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDYAC
ACGKYKGVRYKGIVCDRCGVEVTTSHVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDV
SPKQLEEVIYFAAYIVIDPGDTGLEAKQLLTEAEYREEKAKYGNRFVAKMGAEAIRDLLK
QVDLDKEVTALKAELQTLKGQKRTRAIRRLDILDAFRNSGNKPEWMVMETVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKKLLDMHAPSLIVQNEERMLQEAVDALIDNGR
RGRPVVGPGNRPLKSISHMLKGKQGRFRQNLLGKRVDYSGRSVIDVSPKLKLYQCGVPRP
MALELFKPFVMRELVRRGIASNIKNAKRKIDREDDDIWDVLEYVIKERPVLLNRAPTLHR
LSIQAFEPVLVPGKALRLHPLACEAYNADFDGDQMAIHVPLSDEAVAESRLLMLAAHHIL
TPKDGTPIVTPSQDIVLGNYWLTQAEIGREGEGMIFATPEEATIAYNNGDIHYHTIIGVS
AASMPKKDWGAGHEDSIFVTTYGRLVFNSLFPDDYFYINEPTQDNLKQPMADKYFLEDGQ
DIQDKIAEIGQDLVATPFKKGFLGDTISEIYKRYRVQRTSEYLDDLKEMGYSASTISGLT
IGMADVPETKTKDALVAEARKKVKQVSKMFRRGKLSDKERHDNVIKIWTDCKDAVQQEIA
EFKDQRNPISVMQQSGARGNISNFTQLAGMRGLMATPSGELFEIPVISNFKEGLTVLELF
MSTHGARKGMTDTALKTAQSGYLTRRLVDVAQDVIIREDDCGTDRGITAKAIVDKDAGLI
ESLYDRLVGRFTNRTIRDPQTGEVICPKGVLMDEQMAQKIVDAGVQEVQIRSILTCNTSH
GICRKCYGRNLATAEEVEIGEAVGTVAAQSIGEPGTQLTLRTFHTGGVAGAEDITQGLPR
VQELFEARNPKGRAVISEVDGVVDKIESNAAEHLQEITVKGKIDTRVYTIPYTAKPAVQE
GDEIHRGDKLIPGSIDPKELIKVTDTLTTEEYILAEVQKSYRTQGVDLADKHAEVLTRQM
LQKVRVLDPGETDILPGEVMDIAEFRDRNRDVIISGGIPATAQADILGITKAALETNSFL
SAASFQETTRVLTDASIRGKNDPLLGLKENVIIGKIIPAGTGMPIYRDQVPKADVQQPDS
VYSIADLEKKMEDENKETESK
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacgtaaataagtttgaaagcatgcagattggtttggcttcaccaaacaagatc
agaagctggtcttacggggaagttaagaagccggaaaccatcaactaccggactttgaag
ccagaaaaagacggtctgttcgatgaacggatcttcgggccaaccaaggactacgcttgt
gcctgtggcaagtacaagggcgttcgctacaaggggatcgtctgtgaccggtgcggggtt
gaagtaacgacctctcacgtgcgccgggaacggatgggccacatcgagctggctgctcct
gtaacccacatctggtacttcaagggtatcccatcaagaatgggtctggttttggacgtg
tctccaaagcaattggaagaagttatctacttcgctgcctacattgtcatcgatccaggt
gacactggcctggaagccaagcagctcttgactgaagctgaataccgggaagaaaaggcc
aagtacggcaaccgcttcgtggctaagatgggtgccgaagctatccgcgacctgcttaag
caggttgacctggacaaggaagttactgcccttaaggcagaactgcaaaccttgaagggg
caaaagcggacccgggccatccgccggctggacatccttgatgccttcagaaacagcggc
aacaagcctgaatggatggttatggaaactgttccggttattccgccggacttgcgtcca
atggttcagctggaaggtggccgtttcgccacttccgacttgaacgacctttaccgccgg
gttatcaaccgtaacaaccggttgaagaagctgctggacatgcacgctcctagcttgatc
gtgcaaaacgaagagcggatgctgcaagaagcagttgacgccttgatcgacaacggccgc
cggggccgcccagttgttgggccaggcaaccggccactgaagtctatctcacacatgctg
aagggtaagcaagggcgtttccgtcaaaacttgcttggtaagcgtgttgactactccggc
cgttcagttatcgacgtttctccaaagctgaagctttaccaatgtggtgttccgcgtcca
atggctctggaattgttcaagccgttcgttatgcgggaacttgtccgccggggcattgct
tccaacatcaagaacgccaagcgcaagatcgaccgggaagacgacgacatctgggacgta
ttggaatacgtcattaaggaacgtccagttcttttgaaccgggcacctaccctgcaccga
ctgtcaatccaggcctttgaaccagttttggtcccaggcaaggccctgcgtttgcacccg
ctggcttgtgaagcctacaacgccgacttcgacggtgaccagatggccatccacgtgccg
ttgtcagacgaagctgtagctgaatcccgcctcttgatgctggctgcccaccacatcttg
actcctaaggacggtacgccaatcgttactccgtcccaggacatcgttttgggtaactac
tggctgacccaggctgaaatcggccgggaaggcgaaggcatgatctttgctactccagaa
gaagcaaccatcgcctacaacaacggtgatattcactaccacaccatcatcggtgtgtca
gccgcttcaatgccgaagaaggactggggcgcgggccacgaagacagcattttcgtaact
acttacggccgcttggtcttcaactccctcttcccagacgactacttctacatcaacgaa
ccaacccaggacaacttaaagcagccaatggctgacaagtacttcttggaagatggccag
gacatccaggacaagatcgctgaaattggccaggacctggtggctacgccattcaagaag
ggcttcctgggtgacactatttctgaaatctacaagcgctaccgggtacaaagaacttct
gaatatctggacgacttgaaggaaatgggctactcagcttcaactatttccggcttgacc
atcggtatggctgacgttccggaaaccaagaccaaggatgctttggttgctgaagcccgc
aagaaggttaagcaagtatccaagatgttccgccggggcaagctgtccgacaaggaacgt
cacgacaacgtcatcaagatctggactgactgtaaggatgccgttcaacaggaaattgct
gaattcaaggaccaaaggaacccaatctccgtcatgcagcagtccggtgcccgtggtaac
atctccaactttacccagctggctggtatgcgtggtttgatggccactccaagtggtgag
ttgttcgaaatcccggttatctccaacttcaaggaaggtctgaccgttctggaactgttc
atgtccactcacggcgcccggaaggggatgactgacacggccttgaagactgcccagtct
ggttacctgacccgtcgtttggtcgacgttgcccaggacgttatcattcgtgaagacgac
tgtggcactgaccgcggcattactgccaaggccatcgttgacaaggatgccggcttgatt
gaatcactttacgaccgtctggtcggccgctttaccaaccggactatccgtgacccgcaa
actggtgaagtcatctgccctaagggagtcttgatggacgaacaaatggcgcagaagatt
gttgacgctggcgtgcaggaagttcaaatccggtcaatcctgacttgcaacacttcccac
ggtatctgccggaagtgctacggccggaacctggccactgccgaagaagttgaaatcggt
gaagcagttggtacggttgccgctcagtcaatcggtgaaccaggtacccagctgaccctg
cgtactttccacaccggtggtgttgccggcgcagaagacatcactcaaggtttgcctcgt
gtgcaagaattgttcgaagcccgcaaccctaagggtcgcgcggttatctctgaagttgac
ggtgttgttgacaagatcgaaagtaacgcggctgaacacttgcaggaaatcaccgttaag
ggcaagatcgacaccagagtctacaccattccttacactgctaagccagcagttcaggaa
ggtgatgaaatccaccgtggtgacaagctgatccctggttctatcgaccctaaggaattg
atcaaggtaactgacaccttgacgactgaagaatacatcctggctgaagtccagaagtca
taccggactcaaggggttgacctggccgacaagcacgccgaagtcttgaccagacagatg
ctgcagaaggtccgggttcttgacccaggtgaaaccgacatcttgccaggtgaagtcatg
gacatcgctgaattccgcgacagaaaccgtgacgtcatcatcagcggcgggatcccggct
actgcccaggctgacattctgggtatcaccaaggctgccttggaaaccaacagtttcctg
tcagctgcttccttccaggaaactacccgggttcttaccgacgcgtcaatccgcggcaag
aacgacccgcttcttggtttgaaggaaaacgtcatcatcgggaagatcatcccagctggt
actggtatgccaatttaccgcgaccaagtgccaaaggccgatgttcaacaaccagactca
gtttactcaatcgctgacctggaaaagaaaatggaagacgaaaacaaggaaactgaaagc
aagtaa
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integrated database retrieval system
