Lactobacillus delbrueckii subsp. bulgaricus 2038: LBU_1296
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Entry
LBU_1296 CDS
T01957
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ldl
Lactobacillus delbrueckii subsp. bulgaricus 2038
Pathway
ldl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ldl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBU_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldl03400
]
LBU_1296
Enzymes [BR:
ldl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LBU_1296
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LBU_1296
DNA repair and recombination proteins [BR:
ldl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBU_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zinc-ribbons_6
Ribosomal_S13
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
ADY85481
LinkDB
All DBs
Position
complement(1360758..1361579)
Genome browser
AA seq
273 aa
AA seq
DB search
MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL
LFRLGDLTVVSHLRMEGKYHLTTWDAPVDKHEHLQFAFTDGSSLRYADVRKFGRLQLVET
GTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGLGNIYVDEVLW
QSRINPLTPANELTKDQVKQLHSAINETIEEATKYGGTTVHSFLNAEGGAGHYQEKLKVY
GKEGQPCPRCGEDFVKIKICGRGTTYCLHCQKR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatgccagaagttgaaacggtccgccggaccctgcggcccttggtcgtgggc
aaaacgatcgaccatgtcgatatttggtacgacaaggtcatcaccggcgacccggaaact
tttaaaagggagttaaagggcaagacctttaccgccgttgaccgctatgccaaattcctg
ctcttccgtttaggcgacttgacggtcgtttcccacttgcggatggaaggcaagtaccat
ctaacgacctgggatgcaccggtagacaagcatgagcacctgcagtttgcttttaccgat
ggaagcagcctccgctacgcggatgtccgcaaattcggccgcctgcaattggtggaaact
ggaactgaatttcaggtcaccggcttgaagaatttgggcgttgaagcaaatagtccagaa
tttagattggactactttgaaaaaggcttgaagaagaggagcatgaacatcaagagcctg
ctcatgagtcagaccctggtggccggcctgggcaacatctatgttgatgaagtcctctgg
caaagccggattaaccccttaacgccagctaacgaattaaccaaggaccaggttaaacag
ctccattcagccatcaatgaaaccatagaagaagctactaaatacggcggcaccaccgtc
cacagcttcttaaacgcggaagggggggccggccactaccaggaaaagctcaaggtctat
ggcaaggaggggcagccatgcccccgctgcggggaagactttgtcaagatcaagatctgc
gggcggggaaccacctactgcctgcattgtcaaaagaggtaa
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