Leishmania donovani: LDBPK_250440
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Entry
LDBPK_250440 CDS
T02289
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
ldo
Leishmania donovani
Pathway
ldo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LDBPK_250440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldo03009
]
LDBPK_250440
Ribosome biogenesis [BR:
ldo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LDBPK_250440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp13
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
Utp12
MMS1_N
DUF6769
UTP15_C
Motif
Other DBs
NCBI-GeneID:
13388621
NCBI-ProteinID:
XP_003861374
UniProt:
A0A504WXR2
LinkDB
All DBs
Position
25:complement(126585..129638)
Genome browser
AA seq
1017 aa
AA seq
DB search
MEGKNCFRTRWTQEPIFSGGALASLALPVSDPAASSALSTSAAPEECLVMACGDTVNVVR
ATSGEVLCRYTLPVEDVILHIDAVTVPKASDDGGKDATSGDEGEARAKRDASAAEKSATT
KKAPKKKAGAGKTVKPIEEDEENAGQAEKKVAVPSVAASSSDAAASQGDRELAAPAGSYV
AVGTRSLQVYVLRVDARVESPASPSPSPSAEKGVAADAASEKGNAAGAEGDDADVVGAAT
ASGTLVQYSIELQRNWTAAQHAISVVHFSQSGTYLVSGATDGSVKVWNVFHHHLTHNLVC
AHSSLVQSVCLDPSEAYLAVGSFEGHVTVFDFVAKRIVAAGRPHVQAVESMIFNDALTHV
YSIARDRRLALNKMMFSENRKSTELKEVRAIAVKEHVSSAAFESAGLLHVGAMDGVVSTY
RVSEDEAVQLVRRLPKPPSADAEDGAEEAFVRSLLVAGVPKGTNMRRLRDSVVQDAPHAP
DTSSLYVGDAGFSIQHLCPSSAECSQYEVTRTVVGFLDQLLDVKLFPEASPLHRAVVTNS
KDVRLYASDGCVSSKTLRGHSDVVLCCAVSSNGAWIATGAKDKEVRVWSTESCETVVRGV
GGHTAEVTSLSFNGRQTDTYLLLFSVSSDENVRMWDIGVPLAERVSAKQPRSRVEEIQHR
SGVNAAHTGPIYTVAVAPNDQYVATGGKDKSVNVWNITGKKMYREASLKGHRRGISSLAF
SPVDRVLASASNDGSVRLWSLVSLTCLKSMQVDRTSVLQVGFFNNGTQIVTSNAEGVLRV
WAIASSESVWAAEAHTEKIWALAVEERPSSGETIFYSGAADGVLIATEDYTAEEVARVKE
DRHQMILQEQALSNALRKGEFSEAFMLALRLSHPRHLRQVLVRWCAKDARQCENTLRGEL
LPALDAEQMTRLLQYTREWITNSRHCTVATLVLYVLISSRHFEAVAQVPSMASLIEPLLA
YTRKHSQRQHDLLRRTYYIDYVIRGLAPNVLTSLPPFVHHGEGRREEPPLAKRMRVE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaagaactgcttccgcacgcgatggacgcaggagcctatcttcagcggcggc
gcgttggcctctcttgcgcttccagtgtcagaccccgctgcgtcgtccgcactttccacg
tcggccgctccggaggaatgcctcgtcatggcgtgcggcgacaccgtgaacgtcgtgcgt
gcaacaagtggagaggtgctgtgcaggtacacgttgccagtagaggatgtgattctccac
attgacgccgtgacggtacccaaggcgtcggatgacggcggcaaagacgccacaagtgga
gatgagggagaggcgcgggcgaagcgcgacgccagcgctgcggaaaagtcggccacgacg
aagaaggctcccaagaagaaggccggagccggcaagacagtcaagccgatcgaggaggac
gaagagaacgctggccaagcggagaagaaggtggccgtgccgtccgtggcggcgtcctca
agcgacgcggctgcctctcaaggcgacagggagcttgctgcaccggctggcagctacgtt
gcggttggcacgcgctctctgcaggtctacgtgttgcgcgttgacgcccgcgtcgagtcg
ccggcctcgccctcgccctctccttcagcggagaagggtgtcgctgccgacgccgcttct
gagaaaggcaacgctgcaggggcggaaggcgatgatgcggatgtagtcggcgcggcaaca
gctagcggcacccttgtgcagtactcgatcgagctgcagcgaaactggacggcggcgcag
catgccatctcggtcgtgcacttttcccagagtggcacctacctcgtctcgggtgccacg
gatggcagcgtgaaggtgtggaacgtttttcaccatcacctcacgcacaacttggtgtgt
gcccacagctccctcgtgcagagcgtctgcctcgaccccagcgaggcctacctcgccgtc
ggctccttcgagggacacgtcaccgtcttcgactttgtggcaaagcggatagtggcggca
gggcgcccgcacgtgcaggcggtcgagtccatgatcttcaatgacgcgctcacacacgtc
tactcgatcgccagggatcgccgtctcgctctcaacaagatgatgttcagcgagaaccgc
aaatcgacggagctgaaggaggtgcgcgcgattgcagtgaaagagcacgtgtcgagcgcc
gccttcgagagcgccgggctacttcacgttggcgccatggacggcgtggtcagcacctac
cgcgtgagcgaggacgaggcggtacagcttgtgcgccggcttccaaagccgccgtccgcg
gacgccgaggacggcgccgaggaagcgtttgtgcgctctctgcttgtggccggcgtgcca
aagggcacgaacatgcgccgcctgcgcgactctgtggtgcaggacgcgccgcacgcgccg
gacacctcctccttgtacgttggcgacgcaggattcagcattcagcacctgtgcccctcg
tcggcggagtgcagccagtacgaggtgactcgcacggttgtcggctttctcgatcagctg
ctcgacgtgaagctgtttcctgaggcctcgccgctgcaccgggctgtggtaaccaacagc
aaggatgtgcgcctgtacgcctcggatggttgcgtctcctcgaagactctgcgcggccac
agtgacgtggtgctctgctgcgccgtgagcagtaacggggcgtggatcgccaccggggcc
aaggacaaggaggtgcgcgtgtggtcgaccgagagctgcgagacggtcgtgcgcggtgtt
ggcgggcacacagcggaggtgacatcgctatctttcaacgggaggcagacggacacctac
ctgctgctcttctctgtttccagcgacgagaatgtgcgcatgtgggacatcggcgtccct
ctggcggagcgtgtgtcggcaaagcagccgcggtcccgcgtggaggagatacagcaccga
agcggcgtgaacgcggcccacacgggccctatctacaccgtggctgttgcgcccaacgac
cagtacgtcgcgactggcggcaaggataagtcggtgaatgtgtggaacatcacaggcaag
aagatgtaccgcgaggcctccttgaaggggcatcggcgtggcatctcatcccttgccttc
tcgccggtcgatcgcgttctggcatcggcctcgaatgacggatcagtgaggctgtggtcg
cttgtgtcgctgacgtgcctgaagtcgatgcaggtggaccgcacctcagtactgcaggtg
ggcttcttcaacaacggcacgcagattgtcacgagcaacgcggagggcgtgctgcgtgtg
tgggccatcgcgtcctcggagtcggtctgggcggcggaggcgcacacggagaagatatgg
gccttggcggtcgaggagcgcccctcctcgggcgagacaatcttctactccggtgccgcc
gacggcgtgttgatcgcgaccgaggactacaccgctgaggaggtggcccgcgtcaaggaa
gaccggcaccagatgatcctgcaagagcaggcgctctccaacgcccttcgcaagggcgag
ttctcagaggcgtttatgctggccctgcgactgagtcacccgcgtcatctccgccaagtg
ctcgtgcgctggtgcgccaaggacgcacgccagtgcgagaacacgcttcgcggcgagctt
ctgcccgcccttgatgcggagcagatgacgcggctgctgcagtacacgcgagagtggatc
acgaacagccgtcattgcacggtggctactctggtgctctacgtgcttatctcctcacgc
cactttgaggctgtcgcgcaggtgccgtcaatggcgtcgctgatcgagccgctgctggct
tacacgcgcaagcacagccagcgccagcacgacctgctccggcgcacgtactacatcgac
tacgtcatccgcggtcttgccccgaacgtgctgacctcgcttccgccattcgtgcatcac
ggtgaagggcggagggaggagccgccgctggcaaagcgcatgcgcgtcgagtga
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