Lapidilactobacillus dextrinicus: LH506_05965
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Entry
LH506_05965 CDS
T06302
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx03030
DNA replication
ldx03430
Mismatch repair
ldx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH506_05965 (dnaX)
03430 Mismatch repair
LH506_05965 (dnaX)
03440 Homologous recombination
LH506_05965 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldx03032
]
LH506_05965 (dnaX)
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_05965 (dnaX)
Enzymes [BR:
ldx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH506_05965 (dnaX)
DNA replication proteins [BR:
ldx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH506_05965 (dnaX)
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH506_05965 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_5
RuvB_N
AAA_30
AAA_19
AAA_22
AAA_24
TIP49
Rep_fac_C
AAA_assoc_2
AAA_14
AAA_2
DnaX_C
TniB
AAA_7
Mg_chelatase
SlyX
Spc24
Glyco_tranf_2_5
TSC22
AAA_18
DUF6779
Motif
Other DBs
NCBI-ProteinID:
QFG47024
LinkDB
All DBs
Position
complement(1191538..1193253)
Genome browser
AA seq
571 aa
AA seq
DB search
MAYQALYRVWRPQNFQQVVGQKIVTQTLKNSITTDQISHAYLFAGPRGTGKTSCAKIFAK
AINCLDSQDGEPCNHCENCVAINENRLTDIIEIDAASNNGVDEIRDIRDKVKYPPTQAKY
KVYIIDEVHMLSTGAFNALLKTLEEPPAHVVFILATTEIQKVPATIISRTQRFNFRRISA
DDIAEQLIHILTEKNISYDDQAIAVISRAADGGMRDALSILDQVLSFGNDHVSLENALEV
TGDADDQSLAHYLSAIFNQNVTEALQTINTLFADGCSANRLIEGIIELLRDLLLQKNDAQ
LLTQMSYRQLDADLITAAAQIQSAQLYQMIDLTNEIQLQLKNSAHSELFLEVMTVKLANV
AKTAAPVSEGAAANQAEVEKLQTQVAELKQQLSKLENHGVAVSPRTTMPKASTPVHKTDV
KINRQQVYHVLENATKESLTAVRDVWPDLLSKLTPAKRAMMKVSQPVAASADAIVVAFTY
EFTLRTATTDQDLQDALKQELNALMQNEADIILVQKDQWPKIRKEYIATLRQGKTEKPTT
QATPPAELAQPTIVAEATKLFGDKIVKVEAN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcaagcattgtatcgtgtttggcggccgcagaatttccaacaggtcgttggg
caaaaaattgtcactcaaacattaaaaaattcgatcacgactgatcagattagtcatgcc
tatttatttgccggcccccgcggcacaggtaaaacttcttgtgccaaaatttttgctaag
gcgattaattgtttggatagtcaagacggtgaaccctgcaaccattgtgaaaactgtgtc
gccattaacgagaatcgattaacagatattattgagattgatgcggcttccaataatggt
gtcgatgaaattcgcgatattcgtgataaagtgaaatacccaccaactcaagcaaaatat
aaagtttatattattgatgaagttcatatgctgtcaactggtgctttcaacgccttgtta
aagactttggaggaaccaccagctcatgtggtcttcattttagcaacaacagaaattcaa
aaagttcccgcaaccattatttctcggacgcaacggtttaattttaggcgtatttcagct
gatgatattgctgagcagctaattcatattttaactgaaaagaatattagctacgacgat
caagcaattgcggttattagtcgagctgctgatggtggtatgagggatgcgttaagtatt
ttggatcaagtgttatcatttggtaatgatcatgttagcttagaaaatgcactagaagtt
actggcgatgctgatgatcagtcattagctcattatttaagtgcaatctttaatcagaat
gtgaccgaagccttgcagacaattaacaccttgtttgccgatgggtgttctgctaatcgc
ttgattgagggaattattgaattattgcgtgacttattgttgcaaaagaatgatgcccaa
ttattaacgcaaatgtcttaccgtcaattagatgcagatctcattacagcggcagctcag
attcaaagtgcgcaattatatcagatgattgatttaactaatgagattcaattgcaactt
aaaaatagtgcgcatagtgaactgtttttagaagtgatgacggttaaattggctaacgta
gctaaaaccgctgctccggtttcagaaggggcggcagctaatcaggccgaagttgaaaaa
ctgcagactcaagttgcggaattaaaacaacaattgagtaaacttgaaaatcatggtgtt
gcggtttcgccacgaacaacaatgccaaaagctagtacgccagttcataaaactgatgtg
aaaattaatcgccaacaagtttatcatgtgttagaaaatgcaactaaggaaagtttgacc
gctgttcgtgatgtttggccagatttactgtctaaactaactccggctaaaagggcgatg
atgaaagtttcgcaaccagttgcggctagtgctgatgcgattgtcgtggcttttacttat
gagtttacgttaagaacggcaacgacggatcaagacttacaagatgctttaaagcaggaa
ttgaacgccttaatgcaaaatgaggccgatattatcttagtgcaaaaagatcaatggcct
aagatccgcaaagaatatattgctactttacgacaaggaaagaccgaaaagccgacgaca
caggcaacaccgccagctgaactagcgcaacctactattgttgctgaggcaacgaaactt
tttggtgataaaatcgttaaggtagaagccaattaa
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