Leclercia sp. J807: GNG26_12725
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Entry
GNG26_12725 CDS
T06440
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lea
Leclercia sp. J807
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lea03016
]
GNG26_12725
Enzymes [BR:
lea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GNG26_12725
Transfer RNA biogenesis [BR:
lea03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GNG26_12725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
QGU11160
UniProt:
A0A9Q6LY13
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All DBs
Position
2658000..2659934
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
TAVIHSEKDRESAEPEELIEPFLTRFVGKVLRKDDRLSIIPDHPLLKDAIPCRAERGVTH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGEDHFVPWWVTLARHNLEKEAPEGAAT
DMLDEGLERRDLTALNFVTIDSASTEDMDDALYVEEQADGKLLLTVAIADPTAWIAEGTP
LDDAAKIRAFTNYLPGFNIPMLPRELSDNLCSLRANEVRPVLACRMSIAADGTIEENIEF
FAALIESKAKLVYDEVSDWLENSGSWQPENEAIADQIRLLHRVCLSRSEWRKTHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFD
PANSEALAALLKTHDVHVDPQEVLTLNGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIVKGETIARPQDEATVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVAYKVTEVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgtgctgaaggggtcgtaaaagccacggaaaaaggctttggcttccttgaagtcgatgcg
cagaaaagttacttcattccgcctccgcagatgaagaaagtgatgcacggcgatcgcatt
acggccgtgatccatagcgaaaaggatcgtgaatcagccgagcctgaagaattaattgaa
ccgtttctgacccgttttgtgggtaaggtgctgagaaaagatgaccgtctgtccatcatt
ccggaccatcctctgctgaaagacgccatcccctgccgcgctgagcgtggcgtgacgcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcacccgctgaagggcgac
cgcggtttttatgccgaactgacccagtttatcaccttcggcgaagaccatttcgtaccg
tggtgggtcacccttgcccgccataatctggaaaaagaggcgccagaaggcgcagcgact
gacatgctggacgaaggtcttgagcgtcgcgacctgactgccctgaattttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgttgaagagcaggctgacggt
aaactgctgctaaccgtagcgattgccgatcctacggcctggatcgcagaaggcaccccg
ctggatgacgcggcgaaaatccgtgcctttactaactatctgccgggcttcaacatcccg
atgctgccgcgtgagctgtcagataatctctgctccctgcgcgccaacgaagtgcgcccg
gtactggcctgccgtatgtccatcgccgccgatggcactatcgaagagaacattgagttc
ttcgctgcgctgatcgagtctaaagccaagctggtgtatgacgaggtctctgactggctg
gaaaacagcggtagctggcagccagagaatgaggccattgccgatcagatccgcctgctg
catcgcgtctgcctgagccgtagcgaatggcgtaagacccatgcgctggtctttaaagat
cgccctgactaccgtttcattctcggtgagaaaggcgaagtgctggatatcgtggcggag
ccgcgtcgtattgctaaccgcatcgttgaagagtcgatgattgcggcgaacatttgcgcg
gcccgcgtactgcgcgacaaactcggtttcggtatctataacgtgcacaccgggtttgat
ccggctaacagcgaagccctggctgccctgctgaaaacccacgacgtgcatgtcgatccg
caggaagtcctgaccctgaatggcttctgcaagctgcgccgtgaactggatgcccagccg
tctggtttcctggacagccgcattcgtcgcttccagtctttcgctgagatcagcaccgaa
cctggcccgcactttggcctggggctggaagcctacgccacctggacctcaccgattcgt
aagtatggcgatatgattaaccaccgcctgctgaaagcgatcgttaaaggcgaaaccatt
gcccgtccacaggacgaagccacggtgcagatggccgagcgccgtcgccttaaccgcatg
gcggaacgcgacgttggtgactggctctacgcccggttcctgaaagacaaagccggaacg
gatacccgtttcgcggcggagatcatcgatgtcagccgtggcggcatgcgtgtgcgtctg
gtggataatggcgccgtggcctttattcctgcgccgttcctgcacgccgtacgtgacgag
ctggtctgcagccaggaaaatggcaccgtgcaaatcaaaggcgaagtggcctataaagtg
actgaagttatcgatgtcactattgctgaagtgcgcatggaaacacgcagcattattgcc
cgccctgccgtctga
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