KEGG   Lentzea guizhouensis: BBK82_36770Help
Entry
BBK82_36770       CDS       T04448                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
led  Lentzea guizhouensis
Pathway
led03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:led00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BBK82_36770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:led03400]
    BBK82_36770
Enzymes [BR:led01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BBK82_36770
DNA repair and recombination proteins [BR:led03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BBK82_36770
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: NAD_binding_2
Motif
Other DBs
NCBI-ProteinID: ANZ40725
UniProt: A0A1B2HSR2
LinkDB All DBs
Position
complement(7657005..7657865)
Genome map
AA seq 286 aa AA seqDB search
MSVRVEDRVLKLTNLDKVLYPEFGFTKGEVIDYYTRIAPVLLPHLKDRPVTLKRYPNGVD
GKWFFEKNAPEHRPEWVRTMRLESPGSSKGNEFVNYVMVDELATLVWLANLAALELHVPQ
WTVGPRGGKRDPDLLVFDLDPGAPATIVECSVVAQEIRTVLDDDGVDSWAKTSGNKGMQV
YAYAPAKDTSEYAKVVAQRLAKEHPKLVVATMAKAARTGKVFIDWSQNNPAKTTVAPYSL
RARERPTVSTPVTWDEVEDCEVPEDLVFTADEVLERVGSVGELFGS
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
gtgtcggtgcgggtcgaggaccgggtgctgaagctgacgaacctggacaaggtgctgtac
ccggagttcgggttcaccaagggtgaggtgatcgactactacacccggatcgcgccggtg
ctgctcccccacctcaaggatcgtccggtgacgttgaagcggtatccgaacggggtggac
ggcaagtggttcttcgagaagaacgcgccggagcaccgtcctgagtgggtgcggacgatg
cggttggagtcgccggggagctccaagggcaacgagttcgtgaactacgtgatggtggac
gagctggcgacgttggtgtggctggcgaacctggcggcgttggagttgcacgttccgcag
tggacggtgggtccgcgcgggggcaagcgggatccggatctgctggtgttcgacctggat
ccgggtgcgccggcgacgatcgtggagtgttcggtggtggcgcaggagatccggaccgtg
ctggatgacgacggtgtggactcgtgggcgaagacgtcggggaacaaggggatgcaggtg
tacgcgtacgcgccggcgaaggacacgtcggagtacgcgaaggtggtggcgcagcggttg
gcgaaggagcacccgaagctggtcgtggcgacgatggcgaaggcggcgcggaccgggaag
gtgttcatcgactggtcgcagaacaacccggcgaagacgacggtggcgccgtactcgttg
cgggcgcgggagcggccgacggtgtcgacgccggtgacgtgggacgaggtggaggactgc
gaggtgccggaggacctggtgttcacggcggacgaggtgctggagcgggtcggttcggtg
ggtgagctgttcggtagttga

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