KEGG   Leclercia sp. W17: DVA44_22860
Entry
DVA44_22860       CDS       T05987                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
lee  Leclercia sp. W17
Pathway
lee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DVA44_22860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lee03019]
    DVA44_22860
Enzymes [BR:lee01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DVA44_22860
Messenger RNA biogenesis [BR:lee03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DVA44_22860
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: AXF66731
UniProt: A0A345CG26
LinkDB
Position
4619265..4620530
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQSLIEEEWPDRAIVFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPEALLSELPPPKRLTRARSGNGPRRNSAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaggtg
attgaagcccttgaaaataaagggtttcataactgcacacccattcaggctctcgccctt
ccgctgacgctggcgggtcgcgacgttgcagggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactctctcatccggcaattgctgaccgt
aaagttaaccaaccgcgcgcgctgattatggcaccgacgcgagaactggcggtacagatc
cacgctgatgcagaaccactggcgcaagctaccggcctgaaactcggcctggcctacggc
ggtgacggttatgacaaacagctgaaagtgctggaaagcggcgtcgatattctgatcggc
accaccggccgtcttatcgattacgcgaaacagaaccacattaacctcggcgctatccag
gttgtggtgctggacgaagcagatcgcatgtacgatctcggctttattaaagatatccgc
tggctgttccgccgcatgcctgccgctaaccagcgtctgaatatgctgttctcggccacg
ctctcttatcgcgtccgtgaactggcgttcgaacagatgaacaatgccgaatatgtcgaa
gtggaaccggaacagaaaaccggccaccgtattaaagaagagctcttctacccttctaac
gaagagaaaatgcgtctgctgcagtcgctcattgaagaagagtggccggatcgcgcgatc
gttttcgccaacaccaaacaccgctgtgaagatatctggggccacctggctgcggatgga
caccgtgttggtctgttgactggcgatgtcgcacagaaaaaacgtctgcgcattcttgaa
gagtttacccgtggcgatctggatattctggttgcaacggatgtcgctgcgcgcggtctg
cacattccggcggttacgcacgtcttcaactatgacctgccggatgattgcgaagattac
gttcaccgtatcggacgtaccggtcgtgcgggtgccagcgggcactccatcagcctggcc
tgtgaagagtacgcgctgaacctgccagcaattgagacctatatcggccactcaattccg
gtcagcaaatacaacccggaagcgctgttgagcgaacttccaccgccgaaacgcctgacc
cgagcgcgttctggcaatggtccgcgccgtaacagcgcaccgcgtaatcgtcgtcgttca
ggctaa

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