Lelliottia jeotgali: LJPFL01_0397
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Entry
LJPFL01_0397 CDS
T05035
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lef
Lelliottia jeotgali
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lef03019
]
LJPFL01_0397
03009 Ribosome biogenesis [BR:
lef03009
]
LJPFL01_0397
Messenger RNA biogenesis [BR:
lef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LJPFL01_0397
Ribosome biogenesis [BR:
lef03009
]
Eukaryotic type
Pre-60S particles
RNases
LJPFL01_0397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASV53760
LinkDB
All DBs
Position
421768..422313
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AA seq
181 aa
AA seq
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MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTGSGLVERVKSSTQGDRDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFKKQGTHQAMDDIRESVAELAYYREHFIQ
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagacgaaaacaacctgatttggatcgatcttgaaatgaccgggctagatccc
gagcgcgatcgcatcattgagatcgccacgctggtgaccgatgccaacctgaacattttg
gcggaaggtccgacgattgccgtgcatcagtctgacgaacagttagcgctgatggatgac
tggaacgtacgcacccataccggcagcgggctggtggaacgcgtgaaatccagcactcag
ggcgaccgtgacgccgagctggcgaccattgagttcctgaagcagtgggttcctgcgggc
aaatcgccgatctgcggtaacagcatcggccaggaccgccgtttcctgtttaagtacatg
ccggagctggaagcctatttccactaccgttatctggacgtgagcaccctgaaagagctg
gctcgtcgctggaaaccggaaattctcgatggctttaagaaacagggcacccatcaggcg
atggatgatatccgtgagtcggtggcagaactggcgtattaccgcgaacactttattcag
ctctga
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