Lelliottia jeotgali: LJPFL01_0939
Help
Entry
LJPFL01_0939 CDS
T05035
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lef
Lelliottia jeotgali
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lef03400
]
LJPFL01_0939
DNA repair and recombination proteins [BR:
lef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LJPFL01_0939
Archaeal homologous recombinant proteins
LJPFL01_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
ABC_tran
AAA_15
cobW
MobB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASV54302
LinkDB
All DBs
Position
complement(1011855..1014986)
Genome browser
AA seq
1043 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGVAYRAFWSQNRARNQPDGNLQAPRVELAQCK
DGKILADKVKDKLDLTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKTARTELEMREAQAAGVVLLSEEQQQQLQQGLQVLTDEEKTLLSEQQ
YRSQDFQWLTRHDELLREQQRATAALEQAHTALNQAAPELAKLQLAQPAALLRPLWERQQ
EQTTRLAQTRQQITEVNTRLLTRIALRSRIRHTALHTREQLQAEHHALMQWLAEHDRFRQ
WGQEIAGWRAHFAQLNRDKNQRAALAVRIAELRQKQASLPESSLTLTAEDVGAAMEKQSQ
TRATRQRLTALQARYQPLQKRLKQNSESVLKAQADQAALNTTLEQRRQQYKEKKQHYQDI
ETLCKQEEKIKSLEAERALLQAGLPCPLCGSVTHPAVTDYQALELSANQQRRDRLAKEVA
DLKDEGLLIVGQVNALTQQIQRENAESQSLSQEEQALTKEWQEVCAALNITLNIQEDIAP
WLSEQEHYERQLYQLSQRLALQSQLNEQEEQDRQYQQQQAAARTALEKALLALSLTVPEE
GAEAAWLAARETESAQWQEKQTQSQAIQERINALTPLLDTLPAADTAEMEPAIPDNWREI
HDQCVSLQSQLATLQQQEGLESERLLESQKQFSAALTASIFVDREAFLAALLDNDTLQHL
EKLKQTLESQIQQATALSTEASQRMQTHQALRPEGLESDAQTLQAQLQNLAQQLRENTTR
QGEIRQQLKQDSDNRLHQQGLMQQIEEAARLADDWGYLNSLIGSSTGDRFRKFAQGLTLD
NLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALAL
ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIP
VQIKVKKINGLGYSKLDREFAVE
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgtctgaaaaacctcaactccctcaagggtgaatggaaaatc
gacttcaccgccgagccgtttgccagcaacgggctgttcgccattaccggtgcgaccggt
gcgggaaaaaccaccctgctcgatgccatctgcctggcgctttatcacgagacgccgcgc
ctgaacacggtctcgcagtcgcaaaacgatctgatgacccgcgacacggcggagtgtctc
gccgaagtggagttcgaagtgaaaggcgtggcctatcgcgcattctggagccagaatcgc
gcccgcaaccagccggacgggaacttacaggcaccgcgtgtggaactggcccagtgcaaa
gacggcaaaattctcgccgataaggtaaaagataaactcgatctcaccgcctcgctgacc
gggctggactatgggcggtttacccgttcgatgctgctgtcgcaagggcagttcgcggcg
tttctgaacgcgaaacccaaagagcgtgcagagcttttagaagagctgactggcacggag
atctacggccaaatctccgcaatggtgtttgaaaagcacaaaacggcgcgaaccgagctg
gaaatgcgtgaagcgcaggcggcaggcgtcgtacttctaagcgaagagcagcaacagcag
ctgcaacagggtttgcaggtacttactgacgaagagaaaacccttctcagcgaacagcaa
taccgttcgcaggattttcagtggctgacgcgccatgacgaactgctccgcgagcagcag
cgtgcaaccgcagccctggagcaggcacatacggcgctgaaccaggccgcgccagagctg
gcaaagttacagctggcacaacctgccgcgctactccgccccctctgggaacgccagcag
gagcagaccacgcgtctggcgcagaccaggcagcaaattacagaagtaaacactcgctta
ctcacccgaatcgcgttgcgctcacgcattcgtcataccgcactacacactcgcgagcag
ctacaggctgaacatcacgccctgatgcaatggctggcagaacacgatcgttttcgccag
tggggccaggagatcgccggctggcgtgcgcactttgctcagttgaatcgtgataaaaac
cagcgcgctgcgctcgctgttcgtatcgcggaattacgtcaaaagcaggcaagcttgccg
gagagctcgctgacgctgacggcggaagatgtcggcgcagcgatggagaaacaatcgcag
actcgtgccacacgccagcgtctcactgcgctgcaagcccgctatcagccgctacaaaag
cgacttaaacagaacagcgaaagcgtattaaaagcgcaggccgatcaggccgcactcaat
accacgctggagcagcgtcgccagcaatacaaagaaaaaaagcagcactaccaggacatt
gaaacgctctgcaagcaggaagagaaaatcaaaagtctggaagcggagcgcgcgctgctg
caggccgggctgccttgtccactgtgtggttctgtcacccatccggcggtcacggattat
caggcgctggagctgagcgccaaccagcagcgtcgcgatcggctggcaaaagaggtcgcc
gatctgaaagacgagggtctgctcattgtgggccaggtcaatgccctgactcagcagatc
cagagagaaaatgcagagagccagtcgctgtctcaggaagagcaagcgctcactaaagag
tggcaggaggtgtgtgcggccctgaatatcaccctgaatattcaggaagatattgcccct
tggttgagcgaacaggaacattatgagcgccagctgtatcagttgagccagcgcctggcg
ctgcaaagccagcttaacgaacaagaagagcaggatcgccagtatcagcaacagcaggcg
gcagcccgaacggcgctggaaaaggctctgctggcgctgtctctgacggttcctgaggaa
ggcgcagaagcggcatggctggccgcacgtgaaaccgaatccgcccagtggcaggaaaaa
cagacacaaagtcaggctattcaggaacgaataaacgccctgacgccgctgctcgacacc
cttcctgcagctgacacggcagaaatggaaccggctattcctgataactggcgcgaaatc
cacgaccagtgtgtttctctgcaaagccagctcgccactttacagcagcaggaagggctg
gaaagcgaacggttgctggagtcgcaaaagcagttttccgccgcactgacagccagcatc
ttcgtcgacagagaggctttcctcgccgccctgctggataacgacacgctccagcatctg
gaaaaactgaaacaaacgctggaaagtcagatccagcaggcaacagcgctctccacagag
gccagccaaagaatgcaaactcaccaggcactacgcccggaaggactggaaagcgatgcg
cagacgctacaggcacagctgcaaaatctggcccaacagctacgcgaaaacaccacccga
cagggcgaaatccgccagcagctcaagcaggacagcgataaccgtcttcatcagcaagga
ttgatgcagcagattgaagaagccgcgcgtctggcggatgactggggatatctgaattcg
ctcatcggctccagtaccggcgatcgtttccgtaaatttgcccaggggctgacgctcgac
aatctggtgtggctggcaaatcagcagctcaaccgcctgcacggacgctatctgttgcaa
cgcaaggccagcgatgcgctggagctggaagtggtcgatacctggcaggccgatgcggtg
cgtgatacacgcacgctctccggtggtgaaagcttcctggtgagtcttgcgctggcgctg
gcgctgtctgacctggtaagccataaaacgcgtatcgattcgctattcctcgatgaaggg
tttggcacactcgacagcgaaacgcttgatacggcgctggacgcgctggatgcccttaac
gcgacgggaaaaaccattggcgtcatcagccacgtcgaagcaatgaaagagcgcattccg
gtacaaattaaagtgaagaaaattaacgggctggggtatagcaagctagaccgggagttt
gcggtggagtga
DBGET
integrated database retrieval system
