Leptospirillum sp. Group II: ABH19_12080
Help
Entry
ABH19_12080 CDS
T04007
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
leg
Leptospirillum sp. Group II
Pathway
leg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABH19_12080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leg03019
]
ABH19_12080
Messenger RNA biogenesis [BR:
leg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABH19_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Flavi_DEAD
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
AKS24898
LinkDB
All DBs
Position
2386465..2387805
Genome browser
AA seq
446 aa
AA seq
DB search
MVMTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLP
VLHKIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERN
LKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGR
QSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKKVL
DEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSRFRRGDLKV
LVATDVAARGLDIDGITHVINYDLPQTAEDYVHRIGRTGRAGRTGRALSFFHPADRDIVR
SIETMAGKPIPHSPHSIPLSEQSLRKTFTRRPSFGRSTDRTSRGENRFRTDRGQQGRPRS
STSGNRFSYGNRKSSQNSATSAHEER
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
attgtcatgacttttgaagcacttggactctctccagagattctccgcgccctgaacgat
cttggacacgcttctcccactcccatccagaaacaatccattccccacgtcattgacggc
cgggatcttctgggaatcgcccagaccggaacgggaaagaccggaggtttccttctgcct
gttctgcacaagattgccgaaggcagacggcacgggatacggaatcgggctctcgtcctc
tctccgacccgggaacttgccacccagattcaccaggccgcgaaggattacgcgaaatat
ttgcatacgaatgccgtccttctggtgggcggagtggactttatccgtcaggaaaggaat
ctgaaaaggaactgggacattgtggtcgccactccaggacgccttctggatcatgtccga
cggaacaacctgactctggcaaacacctctctcgtcatcatcgacgaggcggacagaatg
ctcgacatgggatttctgcccgacatcaacacgattgtccgtcaattgccaaaaggccgg
cagtctctccttttttcagcgacctgtcctccccggatccaggaacttgcagccaccttt
cagaacgatgcggtcatcgttcgcgtcgaaccggaaagaaagggttcggaccatatccat
caggaatggattaccgtttcccatggttcgcaaaaacttggccttctcaagaaagtcctg
gatgaagggaaatccgaaaccggacaagtcatcatctttacccggacaaaacgaagtgcg
gaagatctgtccatcgcactcaacgatgccggctatccgtcggacgctctccacggagac
aagtcccagccggtccgaaaccgggttctgagccgcttccgcagaggagacctcaaggtt
ctggtcgcaacagacgtggcggcccggggtctcgacatcgacgggatcacccatgtcatc
aattatgacctgccacaaacggccgaagactatgtccaccggatcggacgaacaggccgg
gcggggagaacggggcgcgcgttgtctttctttcaccccgcagaccgggatatcgtccgg
tcgatcgaaaccatggcaggaaaacccattccacattctccgcactccattcctcttagc
gaacagagtctccggaaaaccttcacccgccggccttccttcggaagatccacggacagg
acctcccggggagaaaatcgtttccggacggaccgggggcagcagggtcggccacgttcc
tcaaccagcgggaaccgcttttcctacggcaaccggaaatcctcccagaattcggcgaca
tctgcccatgaagaaaggtaa
DBGET
integrated database retrieval system
