Leclercia sp. LSNIH3: C3F35_01980
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Entry
C3F35_01980 CDS
T05316
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C3F35_01980
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
leh01007
]
C3F35_01980
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leh03016
]
C3F35_01980
Enzymes [BR:
leh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
C3F35_01980
Amino acid related enzymes [BR:
leh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
C3F35_01980
Transfer RNA biogenesis [BR:
leh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C3F35_01980
Prokaryotic type
C3F35_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AUY37633
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All DBs
Position
complement(403182..405569)
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AA seq
795 aa
AA seq
DB search
MKFSELWLREWVNTELDSEALSNQITMAGLEVDGVEPVAGTFNGVVIGEVVECGQHPNAD
KLRVTKVNVGGERLLDIVCGAANCRQGLKVAVATVGAVLPGDFKIKAAKLRGEPSEGMLC
SFSELGISDDHSGIIELPADAPIGTDLRDYLNLDDNTIEISVTPNRADCLGIIGVARDVA
VLNQTELNAPEIAPVAATITDTLPIQVEAVDACPRYLGRVVKGINVKAPTPLWMKEKLRR
CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGSEAKLNAD
TLVIADHGKALAMGGIFGGDHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRY
ERGVDPALQYKAMERATRLLIDICGGEAGPVIDVTSEAHLPKPATITLRRSKLDRLIGHH
IADAQVSDILRRLGCDVTEGQDEWTAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDEPVQ
AGLVMGSHREADLSLKRVKTMLNDKGYQEVITYSFVDPKVQQLIHPGQEALILPSPISSE
MSAMRLSLLPGLLSTIVYNQNRQQSRVRIFETGLRFVPDTQANLGIRQDLMLAGAICGNR
YEEHWDLSKNSVDFYDLKGDLESVLDLTGKLSEIEFRAEAIPALHPGQCAAIYLKGERVG
FIGVVHPELERKLDLNGRTLAFELEWNKVADRVIPQAQDVSRFPANRRDIAVVVAENVPA
ADILAECKKVGVNQVVGVNLFDVYRGKGVAEGFKSLAISLILQDTSRTLEEEEIAATVAK
CVEALKERFQASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaactgtggttacgcgaatgggtaaacaccgagctggacagcgaggcg
ctctctaaccagatcaccatggctggcctggaagtagacggcgtagagccagttgcaggc
acctttaacggcgtggttatcggtgaggttgtggagtgcggtcagcacccgaacgcagac
aaactgcgtgtcacaaaagttaacgtgggcggcgaacgcctgctcgatatcgtctgcggc
gcagcaaactgccgtcagggcctgaaagtggctgtggcaactgtgggtgcggtgctgccg
ggtgatttcaaaattaaagcggcgaaactgcgcggcgagccgtctgaaggcatgctgtgc
tccttctccgagttgggtatttccgacgatcactccggcatcattgagctgccagcggac
gccccgattggcaccgacctgcgcgactacctgaaccttgatgacaacaccatcgaaatc
agcgtcaccccgaaccgtgccgactgcctgggcatcatcggtgttgcccgcgacgtggcg
gtcctgaaccagaccgaactgaacgcgcctgaaatcgcgccagtggcggccaccattact
gacacgctgccgattcaggttgaagccgttgacgcctgtccgcgctacctgggccgcgta
gtgaagggtatcaatgttaaggcgccaacgccgctgtggatgaaagagaagctgcgtcgt
tgcggtatccgttccatcgatgccgttgttgacgtgactaactacgtcctgctggagctg
ggtcagccgatgcacgcgttcgataaagatcgtatcgaaggcggtatcgtcgtacgtatg
gcgaaagagggtgaaacactggtcctgctggacggcagcgaagccaaattgaatgccgac
accctggtgattgccgatcacggcaaagccctggcgatgggcgggatcttcgggggcgac
cactccggcgtgaacgatgaaacccagaacgtgctgctggagtgtgccttctttagcccg
ctgtccattaccggtcgcgcgcgtcgtcatggtctgcataccgatgcttctcaccgctat
gagcgcggcgtggatccagctctgcaatacaaagcgatggagcgcgcgacccgcctgctg
attgatatttgcggcggcgaagctggcccggtcattgatgtcaccagcgaggcgcatctg
ccgaagcctgcgaccatcaccctgcgtcgtagcaagctggaccgcctgattggccatcac
attgccgatgcacaggtgagcgacattctgcgccgtctgggctgtgacgtcaccgaaggc
caggacgagtggacagccgttgcgccgagctggcgtttcgatatggagatcgaagaagat
ctggtggaagaagttgcccgtgtctacggctacaacaacattcctgatgagccggtgcag
gctgggttggtgatgggttcccatcgtgaagcggatctgtctctgaagcgtgtgaaaacc
atgctcaacgacaaaggttaccaggaagtgatcacctacagtttcgttgacccgaaagtg
cagcagctgatccacccgggccaggaagcgttgatcctgccaagcccaatctccagcgaa
atgtcagccatgcgtctgtcgctgctgccgggcctgctcagcaccatcgtctacaaccag
aaccgtcagcagagccgcgtacgtattttcgaaaccggtctgcgctttgtgccggacacc
caggctaacctcggcattcgtcaggatctgatgctggcaggggcgatctgcggcaaccgc
tatgaagagcactgggacctgagcaaaaacagtgtcgatttttacgacctgaaaggcgat
ctggaatccgtactcgacctgaccggtaaattgtctgaaattgagttccgcgctgaggcc
attccggccctgcatccgggccaatgtgccgcgatttatctgaaaggtgaacgcgttggt
ttcattggtgttgtgcatccagagctggaacgcaaactggatctcaacggccgcacactg
gcgtttgaactggagtggaacaaggtcgcagaccgcgtcattcctcaggctcaggacgtt
tctcgcttcccggcaaaccgtcgtgatatcgccgttgtggtggccgaaaatgtgcctgcc
gcagatattttggccgaatgtaagaaagttggcgtaaatcaggtagttggcgtaaactta
tttgacgtgtaccgcggcaagggcgtagcagagggctttaagagcctggctatcagcctg
atccttcaggataccagccgtacactcgaagaagaggagattgccgctaccgttgccaaa
tgtgtagaggcattaaaagagcgattccaggcatcattgagggattga
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