Leclercia sp. LSNIH3: C3F35_05130
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Entry
C3F35_05130 CDS
T05316
Name
(GenBank) endonuclease VIII
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3F35_05130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_05130
Enzymes [BR:
leh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C3F35_05130
DNA repair and recombination proteins [BR:
leh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C3F35_05130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Motif
Other DBs
NCBI-ProteinID:
AUY38204
LinkDB
All DBs
Position
complement(1053119..1053910)
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AA seq
263 aa
AA seq
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MPEGPEIRRAADSLETAIKGKPLTDVWFAFPQLKPFESRLIGERVTHVETRGKALLTHFS
NQLTLYSHNQLYGVWRVVETGQEPQTTRVLRVKLQTAEKTILLYSASDIEMLMPEQLATH
SFLQRVGPDVLDLSLTAEDVKARLLSAKFRNRQFSGLLLDQAFLAGLGNYLRVEILWEVG
LAPQHKASQLTDLQLDALAHALLAIPRLSYNTRGVVNDNKHHGALFRFKVFHRAGKKCER
CGGKIEKTTLSSRPFYWCPGCQV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggaccggagatccgccgcgcggcggacagccttgagacggcgataaaaggc
aaaccgctcaccgacgtgtggtttgcttttcctcagctaaaaccctttgaatcccggctt
attggggagagggttacgcatgtggagacacggggcaaagcgcttcttacccacttctct
aaccaactgacgctctacagccataaccagctttacggcgtctggcgggtggtggaaacc
ggccaggagccgcagaccacgcgggtgctgcgcgttaagttacagaccgcagagaaaacc
atcctgctttacagcgcctcggatatcgaaatgctgatgccagagcagcttgccacccat
tccttcctgcagcgggtggggccggatgtgctggatttaagcctgacggcagaagatgtc
aaagcgcggttactatcagcaaaattccgcaatcgccagttttccgggctattgctggat
caggcgtttctggcggggttagggaattatctgcgggttgagatcctgtgggaggtaggg
ctggcgccgcagcacaaggcgtcacagttaactgacctacagctcgacgcgctggcgcac
gcgctgctggcgatcccgcgcctgtcgtacaacacccgcggcgtggtgaatgacaataag
catcacggggcgttgttccgttttaaggtgtttcatcgcgcagggaaaaagtgtgaacgg
tgcggcgggaagatagagaagaccacgctctcttcacgacccttttactggtgccctggg
tgccaggtataa
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