Leclercia sp. LSNIH3: C3F35_07600
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Entry
C3F35_07600 CDS
T05316
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh03030
DNA replication
leh03430
Mismatch repair
leh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3F35_07600
03430 Mismatch repair
C3F35_07600
03440 Homologous recombination
C3F35_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leh03032
]
C3F35_07600
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_07600
Enzymes [BR:
leh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3F35_07600
DNA replication proteins [BR:
leh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3F35_07600
DNA repair and recombination proteins [BR:
leh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3F35_07600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUY38646
LinkDB
All DBs
Position
complement(1553171..1556653)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGTAHGA
GMKPVIGADFHVQSELLADEMTQITVLALNNTGYQNLTLLISRAYQRGYGAQGPWIDREW
LAELNEGLLLISGGRMGDVGRCLLRGNGALVEQCVDFYKEYFPDRFYLELIRTGRPDEES
YLHAAVALAEEHGLPVVASNDVRFINADDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALQNSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVLKSKEGL
EERLEFLFPDPAVRAEKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDETGSHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGQYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLADALKAADQHSKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQTVLDGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGASWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgattgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggccgcgcttggcatgcctgcgctggcg
atcaccgacttcaccaacctgtgcggtctggtgaagttctacggaacggcgcacggtgcc
ggtatgaagccggtgattggtgccgactttcacgttcagagcgagcttctcgccgatgaa
atgacgcagatcaccgtgttggcgctgaataacacgggttatcagaacctgacgcttttg
atctcccgcgcctatcagcgtggctacggcgcgcagggtccatggatcgatcgggagtgg
ctggcggagctgaatgaagggctgctgctgatctccggcgggcgtatgggcgatgttggt
cgctgcctgttgcgcggcaatggcgcgctggtggagcagtgtgtcgatttttataaagaa
tatttcccggatcgcttctacctggagctgatccgcaccggccgtcctgatgaagagagt
tatctgcacgccgcggtggcgctggcagaagagcatggattgccagtggtggcatccaac
gatgtgcgctttatcaatgccgatgactttgacgcccatgaaattcgcgtcgccatccac
gatgggtttaccctcgacgatccgaaacgcccgcgtaactattcgccgcagcagtacatg
cgcagcgaagaggagatgtgcgagctgttttccgatatcccggaagcgctgcaaaacagc
gtagagattgctaaacgctgcaacgtcaccgttcgcctgggcgagtatttcctgccgcag
ttcccgaccggcgacatgaccaccgaagacttcctggtcctgaaatcgaaagaaggtctg
gaagagcgtctggagtttctcttcccggatccggccgttcgcgccgaaaagcgcccggaa
tatgacgaacgtctggatattgaacttcaggttatcaaccagatggggttccccggctac
ttcctgatcgtaatggagtttatccagtggtcgaaggataacggcgtaccggtagggccg
ggccgtggttcgggtgccggatcgctggtggcctatgcgctgaaaatcaccgacctcgat
ccgcttgagtttgacctgctgttcgaacgtttcctcaacccggaacgtgtctcgatgccc
gacttcgacgtcgacttctgcatggagaaacgcgaccaggttatcgaccacgtggccgac
atgtacggccgcgatgcggtatcacagattattaccttcgggaccatggccgcaaaagcg
gttatccgcgacgtgggccgcgtactggggcatccgtacggctttgttgaccgtatctcg
aagctggtaccgcccgatccgggcatgaccctggcgaaagccttcgaagcagagccgcaa
ctgcctgaaatctacgaggccgacgaagaggtcaaagcgctgatcgatatggcgcgtaag
ctggagggcgtcacccgtaacgccggtaaacacgccggtggggtggttattgctccgacc
aaaattaccgattttgcgccactctactgcgatgaaaccggttcgcacccggtcacccag
tttgataagaacgacgtagaatacgctggcctggtgaagtttgacttcctcggcttgcgt
acgctcaccatcatcgactgggcgctgaagatgatcaacccgcgccgggccaaacagggc
ctggagccgatcgatatcgccgcgatcccgctggatgataagaaaagcttcgacatgctg
cagcgttcggaaaccacggcggtgttccagcttgaatcccgcggcatgaaagatctgatc
aaacgcctgcagcctgactgcttcgaagacatgatcgccctggtggcacttttccgtccg
gggccgctgcagtcggggatggtagataactttatcgaccgtaagcacggccgagaagag
ctttcctatcctgatgtgcagtggcagcacgaaagcctgaaaccggtgctggagccaacc
tacggcataatcctgtatcaggaacaggttatgcagattgcccaggtactctctggctat
accctcggcggcgcggacatgctgcgtcgtgctatgggtaagaaaaagccagaagagatg
gccaagcagcgttctgtctttgaggatggggcgaaaaagaacggcatcgacggcgaactg
gcgatgaaaatcttcgatctggtagagaaatttgccggatacgggtttaacaaatcgcac
tccgctgcctacgcgttggtctcctatcagaccctgtggctcaaagcgcactacccggca
gagtttatggccgcggtaatgaccgccgatatggataacaccgagaaggtggtgggcctg
gtggatgagtgctggcgaatgggactgaagatcctgccgccggatatcaactccggtcag
taccatttccacgtcaatgatgacggagagattgtttacggtatcggcgcgattaaaggc
gtgggtgaaggcccgatcgaagcgatcatcgaggcccgtaatcagggcggttatttccgc
gagctgttcgacctgtgcgcccgtaccgatattaaaaagcttaatcgccgggtgctggaa
aagctgatcatgtccggggcgtttgaccgtctcgggccgcatcgtgccgcgctgatgaac
tcgctggccgatgccctgaaggccgccgatcagcactcaaaagcggaagctattggtcag
gcggatatgtttggcgtgctggcagaagagccggagcagatcgaacaatcctatgccagc
tgtcagccgtggccggaacagacggttctggatggtgagcgtgaaacgctgggcctgtac
ctgaccgggcacccgatcaaccagtatcttaaagaaattgagcgctatgtcggaggctat
cggctgaaagacatgcatccgacagaacgtggtaagattaccacggctgcggggctcgtc
attgccgcgagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcgtctggaggtgatgttattcaccgatgcactggataaatatcagcag
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcacggttgcgctttggtgcgtcgtggcgtgtctctccgagcgat
cgtttactcaacgatctgcgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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