Leclercia sp. LSNIH1: C2U54_20365
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Entry
C2U54_20365 CDS
T05297
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2U54_20365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_20365
Enzymes [BR:
lei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
C2U54_20365
DNA repair and recombination proteins [BR:
lei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C2U54_20365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AUU86223
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All DBs
Position
4118675..4119535
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AA seq
286 aa
AA seq
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MKYVGAHVSAAGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLTTQVIDEFKAACEKYH
FSPGQILPHDSFLINLGHPVQEALDKSRAAFLDEVQRCEQLGLTLLNFHPGSHLAQIDED
ACLARIAESINIVLAQTQGVTAVIENTAGQGSNLGFRFEHLAAIIDAVEDKSRIGVCIDT
CHAFAAGYDLRSAEACAKTFAEFERVVGFEYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG
HDAFRFIMQDPRFDNIPLVLETINPDIWAEEIAWLKAQQHAEATAE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgttggagcgcacgtcagcgctgccggcggtctggcaaatgccgctattcgc
gccgccgaaatcgaggcgaccgccttcgccctgttcaccaaaaatcagcgccagtggcgc
gccgcgccgttaacgactcaggtgattgatgagttcaaagcggcctgcgaaaaataccat
ttctcccccggccagatcctgccccacgacagtttcctgattaacctcggtcacccggta
caggaggcgctggataaatcccgcgcggccttcctcgatgaggtacagcgctgcgagcag
ctcggtctgacgctgctgaacttccatcccggcagccatctggcgcagatcgacgaagat
gcttgtctggcgcggatcgccgagtcgatcaacatcgtgctggcacagacccagggggtg
acggcggtgattgaaaataccgccggacagggcagcaacctcggtttccgctttgagcat
ctggccgccatcatcgatgccgtggaggataaatcccgcatcggcgtctgcattgatacc
tgccacgcctttgccgccggttacgacctgcgcagcgcggaagcgtgtgcaaaaaccttc
gccgagttcgagcgcgtcgtgggctttgagtacctgcgcggtatgcacctcaacgacgcg
aaaagcacctttggcagccgcgttgaccgtcaccacagcctgggtgaaggcaacatcggc
catgatgcgttccgctttatcatgcaggatccgcgtttcgacaacattccgctggtgctg
gaaaccatcaacccggatatctgggccgaggagatcgcctggctgaaagcgcaacagcat
gccgaggcgaccgcagaatga
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